Transcript Information: S_Transcript_150219.p1


Annotated TAIR IDAT1G13260.1
Annotated Gene Namerelated to ABI3/VP1 1
Annotated Gene Symbol(s)RAV1, EDF4
Annotation TypeHomolog
Chromosome Positionchr1:4542386-4543420 | Forward length=344
E-Value3E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.782626308931
Replicate 23.7091066502489
Replicate 35.0784345737451
Condition 2: 8 Hour
Replicate 12.9051981011746
Replicate 22.0102240806711
Replicate 31.4828415725204
Condition 3: 24 Hour
Replicate 11.4563255660396
Replicate 22.3649194688362
Replicate 32.7780802533171


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_150219.p1 GENE.S_Transcript_150219~~S_Transcript_150219.p1 ORF type:complete len:345 (+),score=23.26,B3|PF02362.17|2.9e-25 S_Transcript_150219:253-1287(+)
ATGTGCATTCAGTCAGTCGATTTGATGGAGTCTGAACAAGAATTATGCCCAAATAAAACTAAAGACGAATCTTCATCATCGTCTAATTGTTCATCTTCCGTCGTATCATCCACTACAAGCCCTCTAACGACGTCGTCGAAGCCGAAACTGCCGTCCTCAAAGTACAAAGGGGTGGTCCCACAGCCTAACGGCCGGTGGGGGGCCCAGCTCTACGTGGGCCACTTGAGGATCTGGTTGGGTACCTTCGACAGGCAAGACCAGGCTGCCCAAGCCTACGACATCGCGGCAATTAAATTCCGAGGGCCCCACGCCATAAGCAACCTCCCCATCCACCACTACAGTAGGCCCCACCTGGAGTTCCTAGGCTCCCTATCCAAAGCCCAGGTTGTGGACATGCTCAGAGGCCACACCTACTACGATGAGCTCGCCCGGTTCATGCGGATCCGGATAGCTAAGAACCGCCAAAAGCGGACTGGGTGGGGCTGCAGCTTGGTGGAGGATCTAGACCATCGAGAGAGGCTGTTCCAGAAGGTTCTGACCCCTAGTGACGTCGGTAAGCTCCACCGTCTGGTGATCCCTAGATGTCATGCCGAGAGACACCTGCCGAGTTTTGTCGACGATGACGGTCTCACTGGAATGATGTTGACATTTGAGGATGTGAGTGGGAGTAGAGTATGGAGGTTTAAGTACAGGTACTGGAGTAGTAGCCAGAACTATGTGTTGACGAAAGGATGGCCTCAGTTTGTTAAGGATAAGGGTTTGAAAGCTGGGGATGTGGTCACATTTTTTAGCTCAATAGGTCCTCAAAAACAGCTTTACATTGAGTCCCGTTCCAGGCCGTTTGTTCCCAAAGAGGCCAAATTACCAACATCTAGATCTAGTGCTACTGGTGATAGTCATCTAGATCTCGATAGTGTTGGTGGTGGTGGTGATTGCAGCAGTCATAATATGGGTTTGGTAAGCTCCAGCAAGCTGAGGTTATTTGGGGTTGATATTTGTCCAATGATCCCTGTTAGTATTAGTACTCCTACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_150219.p1 GENE.S_Transcript_150219~~S_Transcript_150219.p1 ORF type:complete len:345 (+),score=23.26,B3|PF02362.17|2.9e-25 S_Transcript_150219:253-1287(+)
MCIQSVDLMESEQELCPNKTKDESSSSSNCSSSVVSSTTSPLTTSSKPKLPSSKYKGVVPQPNGRWGAQLYVGHLRIWLGTFDRQDQAAQAYDIAAIKFRGPHAISNLPIHHYSRPHLEFLGSLSKAQVVDMLRGHTYYDELARFMRIRIAKNRQKRTGWGCSLVEDLDHRERLFQKVLTPSDVGKLHRLVIPRCHAERHLPSFVDDDGLTGMMLTFEDVSGSRVWRFKYRYWSSSQNYVLTKGWPQFVKDKGLKAGDVVTFFSSIGPQKQLYIESRSRPFVPKEAKLPTSRSSATGDSHLDLDSVGGGGDCSSHNMGLVSSSKLRLFGVDICPMIPVSISTPT*

Click here to download the sequence:
Link to NCBI Protein BLAST