Transcript Information: S_Transcript_150225.p1


Annotated TAIR IDAT1G13260.1
Annotated Gene Namerelated to ABI3/VP1 1
Annotated Gene Symbol(s)RAV1, EDF4
Annotation TypeHomolog
Chromosome Positionchr1:4542386-4543420 | Forward length=344
E-Value4E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.702785559444
Replicate 210.564267312556
Replicate 311.173774956188
Condition 2: 8 Hour
Replicate 12.4312334237774
Replicate 22.6962814321495
Replicate 31.3192218387448
Condition 3: 24 Hour
Replicate 11.9923672238978
Replicate 21.9194107523942
Replicate 31.1501909500704


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_150225.p1 GENE.S_Transcript_150225~~S_Transcript_150225.p1 ORF type:complete len:307 (-),score=10.02,B3|PF02362.17|1.5e-23,AP2|PF00847.16|7.3e-07,AP2|PF00847.16|1.3e+04 S_Transcript_150225:57-977(-)
ATGGAGTGCAAGCAAGGCAGTTCCTTTCATCGAAGCGACGTCGTTTCATCCAGTGATTCACCCAATTCTAACAACAACTCATCATCTTCCGGTTTATCTTTCACTTCAGCAGAAGTACCTCCATCTCCAAAGGTAAGAAAATTGCGGTCCTCAAAATACAAAGGGGTGGTCCCACAGCCAAACGGCCGGTGGGGGGCCCAGCTCTACGATGGCCACTTACGTGTCTGGCTCGGCACCTTCGACCACCAAGAGCAGGCCGCCCGAGCTTACGACATCGCCGCCATAAGCTTCCGCGGGCCCCACGCCGTCAGCAACCTGGCCATCCACCACTACGGAAGGTCCCACCTGGAGTTCCTGTCGTCGATCTCAAGGTCGCAGGTCGTGGACCTCCTCCGGGCCCACACCTACGGCGACGAGCTCGCCCGGTACACGACGCGGGTCAGGGCACGGCGGGCCGGGTCTCCGAGCACAGACCCGACCCGGCTGGAGATGCTATTCCAGAAGGTGCTGACCCGCAGCGACGTGGGGAAGCTCCACAGGCTGGTGATCCCGAGGTGCCACGCTCAGCAGCACCTGCCGAGCTTCAGCGACGTGGATGAGGGGATGATGTTGAGTTTTGAGGATGTAAGAGGAGACAAAGTGTGGAGGTTCAAGTATAGATACTGGAGTAGTAGCCACAACTATGTGTTGACTAAAGGGTGGCCTCAGTTTATCAAGGAGAAGGGTTTGAGAGCTGGGGATGTTGTCACTTTTTATAGCAGCTCATCAGTGAGTCCTCACCATAAGCAACAATTCCACATCGAAACCTATTCCAATTCAAGCCGTCTGGGTCATGATGAGATCCATGGTGTGGGGTTTGGAAAGTCCAACAATGTGCTGAGGTTATTTGGGGTTGATATTTGCCCAATGATTCCGTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_150225.p1 GENE.S_Transcript_150225~~S_Transcript_150225.p1 ORF type:complete len:307 (-),score=10.02,B3|PF02362.17|1.5e-23,AP2|PF00847.16|7.3e-07,AP2|PF00847.16|1.3e+04 S_Transcript_150225:57-977(-)
MECKQGSSFHRSDVVSSSDSPNSNNNSSSSGLSFTSAEVPPSPKVRKLRSSKYKGVVPQPNGRWGAQLYDGHLRVWLGTFDHQEQAARAYDIAAISFRGPHAVSNLAIHHYGRSHLEFLSSISRSQVVDLLRAHTYGDELARYTTRVRARRAGSPSTDPTRLEMLFQKVLTRSDVGKLHRLVIPRCHAQQHLPSFSDVDEGMMLSFEDVRGDKVWRFKYRYWSSSHNYVLTKGWPQFIKEKGLRAGDVVTFYSSSSVSPHHKQQFHIETYSNSSRLGHDEIHGVGFGKSNNVLRLFGVDICPMIPC*

Click here to download the sequence:
Link to NCBI Protein BLAST