Transcript Information: S_Transcript_150443.p1


Annotated TAIR IDAT1G79740.1
Annotated Gene NamehAT transposon superfamily
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:30004367-30006715 | Reverse length=651
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8580210531505
Replicate 21.8154875647048
Replicate 31.9291564941005
Condition 2: 8 Hour
Replicate 12.2604318885664
Replicate 21.3416868779752
Replicate 32.1405035251864
Condition 3: 24 Hour
Replicate 12.4678320261341
Replicate 21.2643688466581
Replicate 32.2161628975207


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_150443.p1 GENE.S_Transcript_150443~~S_Transcript_150443.p1 ORF type:5prime_partial len:717 (+),score=105.89,DUF659|PF04937.11|5.9e-54,DUF659|PF04937.11|3.2e+03,Dimer_Tnp_hAT|PF05699.10|5.5e-14,zf-BED|PF02892.11|1.6e-07 S_Transcript_150443:3-2153(+)
GAGAAGGAGGAAAAAAAAAGGAGCGTGCGTGGAGCGACACAAGTCACACAACTCTTCCAAGGTCGCATCTGCAAAATCCGAGTCTCTCTCCGTTTCTCTCTCCTTCTCCTTATGGTTCGCGAAAAGGATGTATGTTGGGAGTATGCAGATAAATTAGATGGAAACAAACTGAGATGCAAATTCTGTTCAAGGATTCTAAATGGGGGTATTAGTAGATTGAAGCATCATTTATCTAGACTTCCTAGTAAAGGTGTTAATCCATGTAGCAAAGTGAGAGATGATGTGACTGATAGAGTAAGAGCTATAATTGCAGCCAAGGAAGAAATTAGAGAAACTCCCATCACTACTACTAAGAAGCCAAGACTTATCGAAACTAGTTCACCAGGAGGTAATCCTGCTGGTACTCAACCTGTAATGTGCATCGAAACACCACTTCCTGCTGCTAAATTAACTTTGCCACTGTGTCAAATGAACCCTGTATCCTCGAATGATCAAGAAAAAGCAGAAAGGAGTATCGCTTTGTTCTTCTTTGAGAATAAGCTGGACTTTAGCGTGGCTAGGTCTCCTTCGTACCAGCTGATGATCGAAGCAGTTGGAAAGTGTGGTGCTGGGTTGAACGGCCCCTCGTCAGAAAATCTCAAGACTAAGTGGTTGGAAAAGATCAAGTCTGAAACGAACTTAGGGATGAAGGATATCGAGAAGGAGTGGACTAGAACTGGTTGTACTATCATTGCAGACACTTGGACAGACAACAAATCGAAAGCTCTGATAAATTTTTTGGTTTCTTCACCTTCGAGAACTTTCTTTCACAAGTCAGTGGATGCCTCGTCATATTTCAAGAACATAAAGTGTTTGGCTGACATGTTTAACTCTGTCATTCAGGAGATCGGTCCAGAGAATGTCGTGCAGATAATTGTTGATGGTGCTCTCAGTTATGCTGGTATAGCAAACCATATTCTACAGAACTATCCGCAAATGTTTGTTTCTCCATGTGCTTCACATTGCATAAACTTGATCCTTGAAGAGTTTTGCAAAATTGACTGGGTCAATAGATGTATTATAGAGGCACAAACAATCACGAGATTCATATACAACAATACAGCTCTACTTGAACTAATGAAGAAGTTCACAGTGGGTGTGGATGTGATTAGGACAGGCATAACAAAGTCTGTTTCCAACTTTCTTTCCCTGCAGGCATTGTTTAAGCAAAGACCTAGATTGAAACATATGTTCAGTAGTCCCGAGTATTCAGCTAACTCTGCCTCTGTGAACAAACCACAGAGCGTATCTTGTATAACCATTCTGGAGGATAATGAATTCTGGAGAGCAGCCGAAGAATGTATTGCTGTTTCTGAGCCATTTCTGAGGATTCTTAGGGAAGTAGCTGACGGAAAACCTGCAATTGGTTTCATTTATGAGCTAATGATGAAGGCCAAGGAGTCGATAAGAACATATTACATCATGGACGAGAGCAAGTGCAAGACATTTTTAGATATTGTAGACAAGAAGTGGCATAACCAGCTTCATACACCTCTACATTCAGCAGCAGCATTTCTGAATCCGTGCATCCAATATAACCCTGAAGTCAAGTTCATTGCTGCTATCAAAGAAGATTTCTTCAATGTTTTGGAGAAACTGTTGCCTACACCTGAGTTAAGGCGTGACATTACCAATCAGATTCTTTTGTTTACAAGAGCAAGTGGAATGTTTGGATGCAATTTAGCAAAGGAAGCGCGTGATGCAGTTGCCCCTGGGGAATGGTGGGAGCAATATGGAGATTCGGCACCAGTGTTACAGAAAGTAGCTATCAGAATCCTTAGTCAAGTGTGCAGTACTTCAAGCTTTGAGAAGCAATGGACCACATTCCAACAAATACATTCTGAGAAGCGGAACAAAATTGACAAAGAAGCATTGAATGATCTCGTCTACATAAATTACAACCTTAAATTAGGAAGACCAAAGAACAAGTCTACTGAGGTGGATCCGATACAGCTTGGCGACATTGATATGACTTCTGAATGGGTGGAGGAGATTGACAACCCAAGCCCCACTCAATGGCTTGATCGATTTGGTTCTGCCTATGATGTAAGTGACTTGAACACAAGACACTTCAGTACAACAATTTTTGGTGCAAATGACTTCGGTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_150443.p1 GENE.S_Transcript_150443~~S_Transcript_150443.p1 ORF type:5prime_partial len:717 (+),score=105.89,DUF659|PF04937.11|5.9e-54,DUF659|PF04937.11|3.2e+03,Dimer_Tnp_hAT|PF05699.10|5.5e-14,zf-BED|PF02892.11|1.6e-07 S_Transcript_150443:3-2153(+)
EKEEKKRSVRGATQVTQLFQGRICKIRVSLRFSLLLLMVREKDVCWEYADKLDGNKLRCKFCSRILNGGISRLKHHLSRLPSKGVNPCSKVRDDVTDRVRAIIAAKEEIRETPITTTKKPRLIETSSPGGNPAGTQPVMCIETPLPAAKLTLPLCQMNPVSSNDQEKAERSIALFFFENKLDFSVARSPSYQLMIEAVGKCGAGLNGPSSENLKTKWLEKIKSETNLGMKDIEKEWTRTGCTIIADTWTDNKSKALINFLVSSPSRTFFHKSVDASSYFKNIKCLADMFNSVIQEIGPENVVQIIVDGALSYAGIANHILQNYPQMFVSPCASHCINLILEEFCKIDWVNRCIIEAQTITRFIYNNTALLELMKKFTVGVDVIRTGITKSVSNFLSLQALFKQRPRLKHMFSSPEYSANSASVNKPQSVSCITILEDNEFWRAAEECIAVSEPFLRILREVADGKPAIGFIYELMMKAKESIRTYYIMDESKCKTFLDIVDKKWHNQLHTPLHSAAAFLNPCIQYNPEVKFIAAIKEDFFNVLEKLLPTPELRRDITNQILLFTRASGMFGCNLAKEARDAVAPGEWWEQYGDSAPVLQKVAIRILSQVCSTSSFEKQWTTFQQIHSEKRNKIDKEALNDLVYINYNLKLGRPKNKSTEVDPIQLGDIDMTSEWVEEIDNPSPTQWLDRFGSAYDVSDLNTRHFSTTIFGANDFGL*

Click here to download the sequence:
Link to NCBI Protein BLAST