Transcript Information: S_Transcript_150473.p1


Annotated TAIR IDAT3G22400.1
Annotated Gene NamePLAT/LH2 domain-containing lipoxygenase family protein
Annotated Gene Symbol(s)LOX5
Annotation TypeOrtholog
Chromosome Positionchr3:7927011-7931167 | Forward length=886
E-Value3.9E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2839605859078
Replicate 21.645032554727
Replicate 31.294227093586
Condition 2: 8 Hour
Replicate 11.8706482734327
Replicate 21.8643207199772
Replicate 31.5893395144065
Condition 3: 24 Hour
Replicate 11.8204069575495
Replicate 20.99402682352401
Replicate 31.3274760213219


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_150473.p1 GENE.S_Transcript_150473~~S_Transcript_150473.p1 ORF type:complete len:228 (-),score=27.45,Lipoxygenase|PF00305.15|6.7e-62 S_Transcript_150473:646-1329(-)
ATGTTTCGAACTCTATTGACAATATATAGTTTGCTGATTTTGTATGTTTTGAATTCTACACAGACCTACCTTCCTCATCAGACACCAGAAGTGCTGCGCAAATACAGGGAGGAAGAACTTGTGAATCTACGAGGAGATGGGAAAGGAAAGCTGAAGGAATGGGACAGGGTATACGACTATGATTATTACAATGATCTAGGAATGCCAAACAAGAGGAAGGATTATGCACGTCCTGTTCTCGGGGGATCAAGTGAGTACCCTTATCCTCGAAGAGGGAGAACAGGTCGCAAACCAACAAGAACTGATCCAAACACAGAGAGCCGGTTACCACTTCTAAGCCTGGACATATATGTACCAAGAGATGAGCGGTTTGGACACCTGAAATTTTCGGACTTTATAGCATATGCTCTAAAATCCCTAGTCCAGGTGTTAATCCCAGAGTTCCAATCCATATTTGACAAGACACCCAATGAATTTGATTCTTTTGGAGACATTTTGAAGCTTTATGAAGGGGGAATTAAGTTACCAAATGGTGCACTTTCAAAATTTAGAGATCACATCCCATGGGAGTTGCTTAAGGAACTAATTCGCTCTGATGGTGAACAGTTCCTCAAATTCCCAATACCTGATGTGATCAAAGGTATCTTGAAACATTGTTGTACCAATCTGTGTGTGACCATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_150473.p1 GENE.S_Transcript_150473~~S_Transcript_150473.p1 ORF type:complete len:228 (-),score=27.45,Lipoxygenase|PF00305.15|6.7e-62 S_Transcript_150473:646-1329(-)
MFRTLLTIYSLLILYVLNSTQTYLPHQTPEVLRKYREEELVNLRGDGKGKLKEWDRVYDYDYYNDLGMPNKRKDYARPVLGGSSEYPYPRRGRTGRKPTRTDPNTESRLPLLSLDIYVPRDERFGHLKFSDFIAYALKSLVQVLIPEFQSIFDKTPNEFDSFGDILKLYEGGIKLPNGALSKFRDHIPWELLKELIRSDGEQFLKFPIPDVIKGILKHCCTNLCVTI*

Click here to download the sequence:
Link to NCBI Protein BLAST