Transcript Information: S_Transcript_150475.p1


Annotated TAIR IDAT1G55020.1
Annotated Gene Namelipoxygenase 1
Annotated Gene Symbol(s)LOX1, ATLOX1
Annotation TypeOrtholog
Chromosome Positionchr1:20525798-20530143 | Forward length=859
E-Value1.9E-84
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4949688657982
Replicate 21.2410319126102
Replicate 31.7290065078376
Condition 2: 8 Hour
Replicate 13.0655248580879
Replicate 23.2159532419607
Replicate 33.5970492833406
Condition 3: 24 Hour
Replicate 11.2287746963459
Replicate 21.8414346905782
Replicate 32.5222044405116


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_150475.p1 GENE.S_Transcript_150475~~S_Transcript_150475.p1 ORF type:internal len:160 (-),score=28.32,Lipoxygenase|PF00305.15|1.3e-65 S_Transcript_150475:2-478(-)
CCAAATGGTGCACTTTCAAAACTTAAAGATCGCATCCCATGGGAGATGCTTAAGGAACTTATTCGCTCTGATGGTGAACAGTTCCTCAAATTCCCAATGCCTAATGTGATCAAAGAGGATAAAACTGCCTGGAGGACAGATGAAGAGTTTGGACGGGAAATGCTTGCTGGAGTCAATCCTGTTGTCATTCGCCGCCTTGAAGAATTCCCACCAAAAAGCAAATTGGACCCTAGAATATATGGTAATCAAAATAGTTCAATAACCAAAGAGCATATAGAGAAAAACATGGAAGGATTTACTGTAGAAAAAGCACTTCAGAGTAACAGACTATATATACTAGACCATCATGATGCATTAATGCCATACCTGGGGCGGATAAATTCCACTGCGACAAAGACTTATGCAACTCGAACAGTCCTCTTTCTGAAATATGATGGGACGCTGAAGCCATTAGCAATAGAGCTGAGCTTGCCTCAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_150475.p1 GENE.S_Transcript_150475~~S_Transcript_150475.p1 ORF type:internal len:160 (-),score=28.32,Lipoxygenase|PF00305.15|1.3e-65 S_Transcript_150475:2-478(-)
PNGALSKLKDRIPWEMLKELIRSDGEQFLKFPMPNVIKEDKTAWRTDEEFGREMLAGVNPVVIRRLEEFPPKSKLDPRIYGNQNSSITKEHIEKNMEGFTVEKALQSNRLYILDHHDALMPYLGRINSTATKTYATRTVLFLKYDGTLKPLAIELSLPH

Click here to download the sequence:
Link to NCBI Protein BLAST