Transcript Information: S_Transcript_150511.p1


Annotated TAIR IDAT5G53130.1
Annotated Gene Namecyclic nucleotide gated channel 1
Annotated Gene Symbol(s)CNGC1, ATCNGC1
Annotation TypeOrtholog
Chromosome Positionchr5:21537830-21540490 | Reverse length=716
E-Value3.3E-148
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4155851720841
Replicate 21.173552636038
Replicate 32.0273929737291
Condition 2: 8 Hour
Replicate 16.3522439242524
Replicate 25.9499597446081
Replicate 34.3085223882409
Condition 3: 24 Hour
Replicate 11.3168901395039
Replicate 20.56257688310082
Replicate 31.5204778542091


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_150511.p1 GENE.S_Transcript_150511~~S_Transcript_150511.p1 ORF type:complete len:282 (-),score=32.61,Ion_trans|PF00520.27|7.5e-07,cNMP_binding|PF00027.25|4.1e-06 S_Transcript_150511:70-915(-)
ATGAAAAAAGTCGGTTGTACTATTGCGAAACTTTTGTGCTTACCCCATTTCTGGCTGTCTGCTGAAAGCTGTTTGTTGTTGGTTGTACTATCCTGCAGCTCTCTTGGTCAAAATCTCAAAACGAGTACTTTTATTGGAGAGAACTTGTTTGCTGCCTTCATCTGTTTGTTTGGACTGGTTCTGTTTTCATTTCTCATCGGGAATATGCAGAAATATCTGCAATCCACCACTGTCAGAATAGAGGAGATGAGGGTGAGATGGCGAGACGCAGAGCAGTGGATGTCACATCGTATGCTTCCTGAGGAATTGAGGGAGAGGATTAGGAGGTACGAACAATACAAATGGCAAGAAACAAGAGGTGTTGATGAAGAGTTCGTAATTCGTAACCTTCCTAAGGACCTTAGGAGGGACATTAAACTCCATCTTTGCTTGGATCTCCTTATGAGAGTACCGATGTTTAAGAAAATGGACGAAAAGTTGATAGATGCCATGTGTGATCGCCTGAAACCAGTGCTTTACACTGAGAACAGCTCCATTTTACGAGAAGGGGACCCAGTTAACGAGATGCTGTTTATTATGAGAGGAAACCTATTGACTATGACTACAAATGGTGGAAGAACTGGCTTCTTTAACTCGGTTTTTCTTGATGCTGGTGATTTCTGTGGGGAAGAGCTACTTACATGGGCTCTAGATCCACACACCTCCGCAAATCTACCCATCTCAACTAGGACTGTTCAGACTAAAAGTGAGGTTGAAGCCTTTGCACTTATGGGAGACGATCTTAAGTTTGTGGCTTCACAGTTTCGTCGACTTCACAGTAAGCAGTTCCGACACACATTTAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_150511.p1 GENE.S_Transcript_150511~~S_Transcript_150511.p1 ORF type:complete len:282 (-),score=32.61,Ion_trans|PF00520.27|7.5e-07,cNMP_binding|PF00027.25|4.1e-06 S_Transcript_150511:70-915(-)
MKKVGCTIAKLLCLPHFWLSAESCLLLVVLSCSSLGQNLKTSTFIGENLFAAFICLFGLVLFSFLIGNMQKYLQSTTVRIEEMRVRWRDAEQWMSHRMLPEELRERIRRYEQYKWQETRGVDEEFVIRNLPKDLRRDIKLHLCLDLLMRVPMFKKMDEKLIDAMCDRLKPVLYTENSSILREGDPVNEMLFIMRGNLLTMTTNGGRTGFFNSVFLDAGDFCGEELLTWALDPHTSANLPISTRTVQTKSEVEAFALMGDDLKFVASQFRRLHSKQFRHTFK*

Click here to download the sequence:
Link to NCBI Protein BLAST