Transcript Information: S_Transcript_150683.p1


Annotated TAIR IDAT3G55140.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20438819-20440225 | Forward length=331
E-Value9.6E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0592239297584
Replicate 22.1953024435338
Replicate 32.0186079295483
Condition 2: 8 Hour
Replicate 10.63657881543681
Replicate 22.0034491319158
Replicate 32.0149308681326
Condition 3: 24 Hour
Replicate 11.3041721486922
Replicate 23.4954137257053
Replicate 31.5057936958278


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_150683.p1 GENE.S_Transcript_150683~~S_Transcript_150683.p1 ORF type:5prime_partial len:201 (+),score=11.96,Pec_lyase_C|PF00544.15|4.2e-28,Beta_helix|PF13229.2|2.2e-05,Beta_helix|PF13229.2|2e+02 S_Transcript_150683:1-603(+)
ATCATTAATCTCCGTTCTTACCTGAATGTAACATCTTATAAAACAATAGATGGACGTGGACAGAGAATTAAATTCACAGGAAAAGGGTTAAGGCTGAAGGAATGTGAACACGTGATTATATGTAATCTGGAGTTTGAAGGGGGCAGGGGACATGACATAGATGGAATTCAGGTTAAGCCAAATTCTAAGCACATTTGGATAGATCGTTGCACCCTGAGAGATTACGATGATGGACTGATTGACATTACCAGAGGAAGCACGGATATCACTATATCTAGGTGTCACTTTTCTCAGCATGACAAAACAATGCTCATCGGAGCTGACCCATCTCATATTGATGATAGATGCATTCGGGTAACCATTCATCATTGTTTCTTTGATGGAACACGACAGAGGCATCCTCGTTTAAGATTCGGGAAAGTGCATCTGTATAATAATTACACTAGAAACTGGGGTATCTATGCTGTCTGTGCCAGTGTTGAATCACAGATATATTCTCAGTGCAATATTTATGAAGCTGGGCAGAAGAAAGTAGCTTTCATGCACTACACAGAGAAGGTGACTCCTTTTATATTGCTACATTTCGTTTTGCATTACCTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_150683.p1 GENE.S_Transcript_150683~~S_Transcript_150683.p1 ORF type:5prime_partial len:201 (+),score=11.96,Pec_lyase_C|PF00544.15|4.2e-28,Beta_helix|PF13229.2|2.2e-05,Beta_helix|PF13229.2|2e+02 S_Transcript_150683:1-603(+)
IINLRSYLNVTSYKTIDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDIDGIQVKPNSKHIWIDRCTLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHIDDRCIRVTIHHCFFDGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKVAFMHYTEKVTPFILLHFVLHYL*

Click here to download the sequence:
Link to NCBI Protein BLAST