Transcript Information: S_Transcript_150684.p1


Annotated TAIR IDAT3G55140.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20438819-20440225 | Forward length=331
E-Value1.2E-196
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.96909350897
Replicate 229.05968445555
Replicate 329.008395630216
Condition 2: 8 Hour
Replicate 129.888270828104
Replicate 231.068833277165
Replicate 329.166185341854
Condition 3: 24 Hour
Replicate 130.616358447176
Replicate 231.532259584483
Replicate 336.05913765335


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_150684.p1 GENE.S_Transcript_150684~~S_Transcript_150684.p1 ORF type:complete len:391 (+),score=47.07,Pec_lyase_C|PF00544.15|2.6e-27 S_Transcript_150684:149-1321(+)
ATGGGGAATTCCAAATCACAGTTACAGGGACATAGCAAATATCGGCCCAATCAGCATCATCAACATCATCAATACCCTCTCCCTCCAAACCCTCCCAATCCCTTCCCAAGCTATATATATCCACCGCAACCTCAACCACAATCACAATCGACGAGCAATTCAATGGCGCTGACGTTACCTTACTCTCACGTTGACTCCTCCTTGCGTGCTCTCGCCTCCCAGGCTGAGGGTTTTGGCCGTTTCGCCATTGGTGGCCTTCATGGCCCCGTTTTTCATGTTTCCACTCTTGCAGATGATGGACCCGGATCTCTTCGAGAAGCCTGTCGTAAGAAGGAACCACTCTGGATAGTGTTTGAAGTTTCAGGGATCATTAATCTCCGTTCTTACCTGAATGTAACATCTTATAAAACAATAGATGGACGTGGACAGAGAATTAAATTCACAGGAAAAGGGTTAAGGCTGAAGGAATGTGAACACGTGATTATATGTAATCTGGAGTTTGAAGGGGGCAGGGGACATGACATAGATGGAATTCAGGTTAAGCCAAATTCTAAGCACATTTGGATAGATCGTTGCACCCTGAGAGATTACGATGATGGACTGATTGACATTACCAGAGGAAGCACGGATATCACTATATCTAGGTGTCACTTTTCTCAGCATGACAAAACAATGCTCATCGGAGCTGACCCATCTCATATTGATGATAGATGCATTCGGGTAACCATTCATCATTGTTTCTTTGATGGAACACGACAGAGGCATCCTCGTTTAAGATTCGGGAAAGTGCATCTGTATAATAATTACACTAGAAACTGGGGTATCTATGCTGTCTGTGCCAGTGTTGAATCACAGATATATTCTCAGTGCAATATTTATGAAGCTGGGCAGAAGAAAGTAGCTTTCATGCACTACACAGAGAAGGCCGCTGATAAAGAGGAGGCAGCATGTGGCTGGATTAAATCTGAAGGGGACCTATTTCTCAATGGAGCTGAAGCAGGATTACGCGTTCCTCCCTGTGAAGATAGTGTGTTTCATCCTAGCGAATTCTATGATGCCTGGACAGTGGAACCACCTACTGAATCTCTTAAGCATGTTCTTCAGCACTGTACAGGGTGGCAAAATACTCCTCGTGTCCTTGATAAAGGCATCGATGCTCAGTCGTTGCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_150684.p1 GENE.S_Transcript_150684~~S_Transcript_150684.p1 ORF type:complete len:391 (+),score=47.07,Pec_lyase_C|PF00544.15|2.6e-27 S_Transcript_150684:149-1321(+)
MGNSKSQLQGHSKYRPNQHHQHHQYPLPPNPPNPFPSYIYPPQPQPQSQSTSNSMALTLPYSHVDSSLRALASQAEGFGRFAIGGLHGPVFHVSTLADDGPGSLREACRKKEPLWIVFEVSGIINLRSYLNVTSYKTIDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDIDGIQVKPNSKHIWIDRCTLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHIDDRCIRVTIHHCFFDGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKVAFMHYTEKAADKEEAACGWIKSEGDLFLNGAEAGLRVPPCEDSVFHPSEFYDAWTVEPPTESLKHVLQHCTGWQNTPRVLDKGIDAQSLQ*

Click here to download the sequence:
Link to NCBI Protein BLAST