Transcript Information: S_Transcript_150856.p1


Annotated TAIR IDAT5G09920.1
Annotated Gene NameRNA polymerase II, Rpb4, core protein
Annotated Gene Symbol(s)RPB15.9, ATRPB15.9, RPB15.9.9, NRPB4
Annotation TypeOrtholog
Chromosome Positionchr5:3096276-3097370 | Forward length=138
E-Value1E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 166.377776336584
Replicate 258.620318766188
Replicate 355.43543346059
Condition 2: 8 Hour
Replicate 166.827821982178
Replicate 257.36037936116
Replicate 356.387852675968
Condition 3: 24 Hour
Replicate 150.421039219569
Replicate 251.388875085904
Replicate 352.936965292133


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_150856.p1 GENE.S_Transcript_150856~~S_Transcript_150856.p1 ORF type:5prime_partial len:172 (+),score=28.84,RNA_pol_Rpb4|PF03874.12|6.8e-20 S_Transcript_150856:1-516(+)
CACAGGCACGGGGCACCACTCACCGGCATCTTCTCTCACGAGTCACGGTACCACCCCGAGGCCCCGACACCGTCAGTCAGACTCACGTCACTCCAAGCCATGTCCGGGGAAGAAGAAGAAAATGCAGCAGAGCTGAAACTCGGGGAGGACTTCGTGAAAGCCAAATGTCTAATGAACGGCGAAGTGGCTATGATTCTAGAACGAAGGCTCGAACAACTCCAACAAGTCTCAGATGACCCTCTATGCCAGATGCCTCAAGTCTTCGAGAAATCTCTGCAATACGTCAAGCGATTTAGCCGTTACAAGAACCCTGATGCCGTCAGACAGGTCAGAGAAATCCTTAGCCGTCATGAATTGGCTGAATTTGAACTTGCTGTTCTCGGTAACCTCTGCCCTGAGACTATTGAAGAAGCTATTGCTATGGTCCCTTCTTTGAAGGACAAAGGGAGGGGTCTTGATGATGAGGCTATTGAGAAGATGTTAAATGATCTTGCCCTTATTAAGAAGTTTGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_150856.p1 GENE.S_Transcript_150856~~S_Transcript_150856.p1 ORF type:5prime_partial len:172 (+),score=28.84,RNA_pol_Rpb4|PF03874.12|6.8e-20 S_Transcript_150856:1-516(+)
HRHGAPLTGIFSHESRYHPEAPTPSVRLTSLQAMSGEEEENAAELKLGEDFVKAKCLMNGEVAMILERRLEQLQQVSDDPLCQMPQVFEKSLQYVKRFSRYKNPDAVRQVREILSRHELAEFELAVLGNLCPETIEEAIAMVPSLKDKGRGLDDEAIEKMLNDLALIKKFE*

Click here to download the sequence:
Link to NCBI Protein BLAST