Transcript Information: S_Transcript_151223.p1


Annotated TAIR IDAT1G79870.1
Annotated Gene NameD-isomer specific 2-hydroxyacid dehydrogenase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:30044794-30045851 | Forward length=313
E-Value1.7E-169
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1143.23557989635
Replicate 2143.19734114081
Replicate 3125.39885840283
Condition 2: 8 Hour
Replicate 148.016085841443
Replicate 253.435944203169
Replicate 357.159056316542
Condition 3: 24 Hour
Replicate 1164.04533525739
Replicate 2171.78303041945
Replicate 3160.56963938161


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_151223.p1 GENE.S_Transcript_151223~~S_Transcript_151223.p1 ORF type:complete len:314 (+),score=51.92,2-Hacid_dh_C|PF02826.15|8.8e-55,2-Hacid_dh|PF00389.26|3.2e-25 S_Transcript_151223:271-1212(+)
ATGGAGTCGATAGGAGTGCTAATGCCAATCCCAATGAACGACTACTTAGAAGAGCAACTGAGCAAACGCTACAACCTCTTCCGTTTCTGGACAGTTCAAGACAGAGCCCAATTCCTGACCCAAAACGCGTCGTCCATACGCGCCGTCGTGGGAAACGCCTTCTCCGGAGCCGACGCTTCCCTCATCGACGCATTGCCGAAGCTGGAGATAGTGGCAAGCTTCAGTGTGGGGCTTGACAAGATTGATCTGCCCAAGTGTAAGGAGAAAGGTATTCGAGTTACTAATACCCCTGATGTCCTCACTGATGACGTGGCTGATCTTGCTATTGGGCTCATGCTTTCTGTCTTGAGAAAGATTCCTCAGTGTGATCGTTATGTGAGGGTTGGGCTTTGGAGGAAAGGTGATTTCAAGTTGACCACTAGGTTCAGTGGCAAAAGAGTTGGAATTATCGGTTTGGGCAGGATTGGTGTTGCAATTGCCAAGAGAGCTGAAGCGTTTAACTGTCCAATTTCTTACTATTCTAGATCGAAAAAAGCAGATTCCAATTACACTTACTATCCAACTGTTGTTGAACTGGCCTCCAATTGTGATATACTGGTAGTTGCCTGTGCCCTAACAGAGGAAACACGCCACATTGTTAACCATGAAGTCATTGATGCCTTGGGCCCAAAGGGTTACCTGATCAACATTGGAAGAGGTCCTCATGTGGATGAACCAGAGCTGGTATCAGCACTGGCCGAAGGCAGGCTAGGAGGAGCTGGGCTTGATGTCTATGAAAATGAGCCTCATGTTCCAGAAGAGTTGTGGAAACTTGACAATGTAGTGCTCTTGCCTCATGTTGGTAGTGGCACTGTGGAAACACGCACAGACATGGCTGACATTGTTCTTGGTAACTTGGAGGCTCACTTCAATGGCAAACCACTGTTGACTCCGGTCGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_151223.p1 GENE.S_Transcript_151223~~S_Transcript_151223.p1 ORF type:complete len:314 (+),score=51.92,2-Hacid_dh_C|PF02826.15|8.8e-55,2-Hacid_dh|PF00389.26|3.2e-25 S_Transcript_151223:271-1212(+)
MESIGVLMPIPMNDYLEEQLSKRYNLFRFWTVQDRAQFLTQNASSIRAVVGNAFSGADASLIDALPKLEIVASFSVGLDKIDLPKCKEKGIRVTNTPDVLTDDVADLAIGLMLSVLRKIPQCDRYVRVGLWRKGDFKLTTRFSGKRVGIIGLGRIGVAIAKRAEAFNCPISYYSRSKKADSNYTYYPTVVELASNCDILVVACALTEETRHIVNHEVIDALGPKGYLINIGRGPHVDEPELVSALAEGRLGGAGLDVYENEPHVPEELWKLDNVVLLPHVGSGTVETRTDMADIVLGNLEAHFNGKPLLTPVV*

Click here to download the sequence:
Link to NCBI Protein BLAST