Transcript Information: S_Transcript_151560.p1


Annotated TAIR IDAT4G01990.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:871268-872885 | Reverse length=502
E-Value3.9E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.92656483990957
Replicate 20.72546890227805
Replicate 31.4982493530198
Condition 2: 8 Hour
Replicate 11.8974235098416
Replicate 22.4232563323495
Replicate 32.5150226381119
Condition 3: 24 Hour
Replicate 11.3943542653571
Replicate 20.65755739583213
Replicate 30.63421001405514


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_151560.p1 GENE.S_Transcript_151560~~S_Transcript_151560.p1 ORF type:complete len:517 (+),score=88.77,PPR|PF01535.16|2.1e+03,PPR|PF01535.16|1.3e+04,PPR|PF01535.16|6.7e-05,PPR|PF01535.16|0.0016,PPR|PF01535.16|22,PPR|PF01535.16|1.3,PPR|PF01535.16|0.25,PPR|PF01535.16|0.48,PPR_2|PF13041.2|4.5e+02,PPR_2|PF13041.2|4.3e+03,PPR_2|PF13041.2|0.00043,PPR_2|PF13041.2|1.5e-08,PPR_2|PF13041.2|2.2e+02,PPR_2|PF13041.2|37,PPR_2|PF13041.2|2.2,PPR_2|PF13041.2|1.4e+04,PPR_3|PF13812.2|11,PPR_3|PF13812.2|0.26,PPR_3|PF13812.2|0.025,PPR_3|PF13812.2|22,PPR_3|PF13812.2|48,PPR_3|PF13812.2|1.6e+02 S_Transcript_151560:113-1663(+)
ATGATGCATGAATTCCTGATACAAAAAATGAAGATCTTCAACTTGAACATCAGCTCCCGTCTAATCTCCGGCGAGTCTTCACTTCTCCGGCGACATTCAACAGCAACTCCGGCGAGGCCAAGAAAAGAGACATCAGGAAATCCTAACAGAATCGATAAGTATAGTCTTTTCAAGATGATATCATCAGTGGAATCAAGTAGCAAGGTGTCAAGTTTATTGTACCAATTAGCTAGCCAAGGCAAGCAGTTCAACAAGAGTGAACTTGTTTCTTGCGTTAAGACTTTCCGTAAATTTGGCCGCTTTCAACATTGCCTCGAGATCCTGGAATGGATGGAGAAGGGTACTGTGAGCTATTCAGAAGCAGACTATGCATTACGTTTAGGTATCATATGTAACATTAAGGGTATTGATGAAGCACAGAAGTACTTTGATAGCCTTCCCCCTGCTGTGAAGAACCGTCCTGCTTACGGAGCTCTTCTCAATTGCTATTGTACTCAAAAGATGACAGAGAAAGCGTTGGCTCTATTTGAAAAGATGGATGAGTTGAATTATATATCCAATGCACTGCCCTTCAACAATCTTATGGGTCACTATATGAAAGTAGGCCAGCCAGAGAAGGTCCCTTCTCTTGTGAAAGAGATGAAGAAAAGGAATATCCCACTAAATGACTACTCGTACAGTATCTGGATACAAAGGTATGGATGTCTTAACAATCTTGAAGGGTTAGAGAGAGTTGTAAATGAAGTTCAAGAACATAATGGCATGAAGAATGGATGGAACATATATAGCAGCCTTGCATCAGCATATATCAAGGTTGGCCAGTCTGAGAAAGCCCAAACAGCCTTGAAGAAGCTGGACGAAGTCTTAGATAATTCATACAATCTCGGTCGTGAGGCATATTATTTTCTGATTACCATGTGCGTTGATGATAGTGATTTAGAGTTTCTGACCCAGGCATGGAATAAGTTCAAGTCCAAGTTCAAATCTTGTAACAACTCTAGCTACTTGACTATGCTAAAAGCCTTATCAAAACTAGGCGATATTGAAGGCCTGAAAATGTGCTTCAAGGAGTGGGAGTCGAGCTACCAGAGTTATGATGTCAGGCTACCGGTCGTTGTTATAAGTGCTTACTTGAAGCAGGACATGGTTGAAGAAGCTGAATTACTGCTAAAAGATGCCGCAGAGAGGTCTGGACAAAATATGTACAACGCCCATCTCCCTCTAGCAAACTACTACTTGGACAAACGTCAGATTGATTGGGCCCTGAGGCATTTGGAACTGGCGGTTCATAACAAGAGGCAGTTGCTCTCCGAGAGGATTAATCCATTCTTCGAGTATTTTAAAGAAGAGCGAGATGTCGACGGGGCTGAAGAATTCTGCCAAATTTTAAAGAAAGACCAGTCTCTTGGTTCTGGAGCCTACTTGTGGTTGCTTCAGGTTTATGCAGCTGCTGGGAAAACAGCTCTTGATTTGCGTCAGAGGATAGAGAAAGATGGCGTAGAGATTGGAACCGAGCATGAGGAGTTGCTCATGAAAGTATGCCCTAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_151560.p1 GENE.S_Transcript_151560~~S_Transcript_151560.p1 ORF type:complete len:517 (+),score=88.77,PPR|PF01535.16|2.1e+03,PPR|PF01535.16|1.3e+04,PPR|PF01535.16|6.7e-05,PPR|PF01535.16|0.0016,PPR|PF01535.16|22,PPR|PF01535.16|1.3,PPR|PF01535.16|0.25,PPR|PF01535.16|0.48,PPR_2|PF13041.2|4.5e+02,PPR_2|PF13041.2|4.3e+03,PPR_2|PF13041.2|0.00043,PPR_2|PF13041.2|1.5e-08,PPR_2|PF13041.2|2.2e+02,PPR_2|PF13041.2|37,PPR_2|PF13041.2|2.2,PPR_2|PF13041.2|1.4e+04,PPR_3|PF13812.2|11,PPR_3|PF13812.2|0.26,PPR_3|PF13812.2|0.025,PPR_3|PF13812.2|22,PPR_3|PF13812.2|48,PPR_3|PF13812.2|1.6e+02 S_Transcript_151560:113-1663(+)
MMHEFLIQKMKIFNLNISSRLISGESSLLRRHSTATPARPRKETSGNPNRIDKYSLFKMISSVESSSKVSSLLYQLASQGKQFNKSELVSCVKTFRKFGRFQHCLEILEWMEKGTVSYSEADYALRLGIICNIKGIDEAQKYFDSLPPAVKNRPAYGALLNCYCTQKMTEKALALFEKMDELNYISNALPFNNLMGHYMKVGQPEKVPSLVKEMKKRNIPLNDYSYSIWIQRYGCLNNLEGLERVVNEVQEHNGMKNGWNIYSSLASAYIKVGQSEKAQTALKKLDEVLDNSYNLGREAYYFLITMCVDDSDLEFLTQAWNKFKSKFKSCNNSSYLTMLKALSKLGDIEGLKMCFKEWESSYQSYDVRLPVVVISAYLKQDMVEEAELLLKDAAERSGQNMYNAHLPLANYYLDKRQIDWALRHLELAVHNKRQLLSERINPFFEYFKEERDVDGAEEFCQILKKDQSLGSGAYLWLLQVYAAAGKTALDLRQRIEKDGVEIGTEHEELLMKVCPS*

Click here to download the sequence:
Link to NCBI Protein BLAST