Transcript Information: S_Transcript_15171.p1


Annotated TAIR IDAT4G20440.1
Annotated Gene Namesmall nuclear ribonucleoprotein associated protein B
Annotated Gene Symbol(s)smB
Annotation TypeOrtholog
Chromosome Positionchr4:11022843-11023616 | Reverse length=257
E-Value4.5E-138
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.756894161074
Replicate 226.261590338357
Replicate 324.377595792164
Condition 2: 8 Hour
Replicate 129.516111165582
Replicate 227.558401784577
Replicate 327.954000838367
Condition 3: 24 Hour
Replicate 116.17579607954
Replicate 218.97800138919
Replicate 316.66924041999


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_15171.p1 GENE.S_Transcript_15171~~S_Transcript_15171.p1 ORF type:complete len:289 (+),score=89.18,LSM|PF01423.18|3.8e-18 S_Transcript_15171:254-1120(+)
ATGTCGATGTCAAAGAGCTCAAAGATGCTTCAATTTATCAATTACCGTATGCGAGTCACAATCCAAGATGGCCGCCAGCTTGTTGGAAAATTCATGGCCTTTGACCGTCACATGAACCTTGTCCTTGGTGACTGTGAGGAGTTCCGCAAACTCCCACCTGCCAAAGGGAAACCAAATGAAGAACGAGAAGACCGTCGTACACTTGGCCTTGTACTTCTCCGTGGTGAAGAAGTTATTTCCATGACTGTTGAGGGCCCTCCACCTCCTGAAGAGTCACGTGCCAAGGCTGTGTCTGCTACTGCAATGGCTGGTCCAGGTCTGGGCCGGGCGGCCGGTCGTGGTGTCCCTGCTGCTCCACTTGTTCAGGCTCAACCCGGTTTGGCTGGGCCGGTTCGGGGTGTGGGTGGACCGGCTCCAGGAATGATGCAACCTCAAATCTCGAGACCGCCGGTTCCTGCTGCTCAGTTGTCAGCCCCACCAATGAGTTACCCTGCTGGGGCCCCTCCGGTGATCAGGCCGCCTGGTCAGCAGATGCCCGGGTTTCCGCCTCAGGGTGGGATGCCGCCAAGGGGACCGCCGCCTCCACCTGGGCAGTTCCCCGCTGTTTCAAGGCCTGGTTCTGGTCCCCCTGGGCCGTTCCCTGTTCCACCTCCTGGGCAGTATGCACAGAGGCCTGGAATGCCAGTTCCACCTCCTCCAATGATGCGGGGGCCACCACCTCCCAGGCCTGGTATGCCAGCCCCACCCCCTCCTCGTCCCGGGATGCCTCTCCCCCCTGGTGGGCAAGTACCAGTTTATGGCCCCCCTCGGCCTGGTATGCCTCCACCACCAAATGCTCAACAGCCTCCTCAGAATCAGCAGCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_15171.p1 GENE.S_Transcript_15171~~S_Transcript_15171.p1 ORF type:complete len:289 (+),score=89.18,LSM|PF01423.18|3.8e-18 S_Transcript_15171:254-1120(+)
MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKPNEEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVSATAMAGPGLGRAAGRGVPAAPLVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPAAQLSAPPMSYPAGAPPVIRPPGQQMPGFPPQGGMPPRGPPPPPGQFPAVSRPGSGPPGPFPVPPPGQYAQRPGMPVPPPPMMRGPPPPRPGMPAPPPPRPGMPLPPGGQVPVYGPPRPGMPPPPNAQQPPQNQQQ*

Click here to download the sequence:
Link to NCBI Protein BLAST