Transcript Information: S_Transcript_151724.p1


Annotated TAIR IDAT3G25980.1
Annotated Gene NameDNA-binding HORMA family protein
Annotated Gene Symbol(s)MAD2
Annotation TypeOrtholog
Chromosome Positionchr3:9503232-9504402 | Forward length=209
E-Value8.9E-126
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.3476973107232
Replicate 26.0171244247768
Replicate 33.1669344790021
Condition 2: 8 Hour
Replicate 13.9491463550246
Replicate 23.2390218569301
Replicate 34.9521666152987
Condition 3: 24 Hour
Replicate 11.2503805364987
Replicate 23.1286743253543
Replicate 33.2270629205199


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_151724.p1 GENE.S_Transcript_151724~~S_Transcript_151724.p1 ORF type:5prime_partial len:297 (+),score=61.71,HORMA|PF02301.14|8.7e-23 S_Transcript_151724:2-892(+)
GGCAAAAAAACAGAGAAAACTAGCCGTTATTATTATCCTTTTAGCCACTTCCATTTCAATTCCCTCCATCAATCAAATAAAATTTCATCAATTAATAAAACTATAAACCCTACATACATTCCCCCATATTTGCAGCTCTCATACTCTCATTTTCTCAATCCATTTCCCTTCATCAATCAACCCTTTGAAAAGAAGCAAAAAGAAAACCCTAAAAAATCCGTTTTTTTTTTCTTTGATCTGAGAGAAATCTTGAAGGGGTTTTTATCAATGGCTTCAAAGACTGTTACTAAAGATATCATCACTCTTCGTGGCTCAGCAGCAATTGTTAGTGAATTCTTTGGGTATGCTGCCAACAGTATTTTGTACAATAGAGGGGTATACCCAGAAGAAAGTTTTGTGAAAGTGAAGAAATATGGATTGCCAATGCTTCTTACTCAAGATGATGGGGTCAAATCCTTCCTTGCTAACCTTACTTCTCAGCTTTCAGAATGGCTTGAAGCTGGGAAACTACAGAGAGTGGTTCTAGTGATAATGAGTAAATCTACTAATGAAGTTCTTGAGAGGTGGAATTTTAGCATTGAAACTGACAGTGAAGTGGTTGAAAAAGGGGTGTCAAGGGAAAAGAGTGACAAGGAAATCATGAGGGAGATACAAGCAATCATGAGACAAATTGCTTCTAGTATTACTTACTTGCCTTGCCTTGATGAACCTTGTATATTTGATGTGCTGGCATACACAGACAAGGATGTAGCAGCACCCTTCAGTTGGATTGAGAGTGACCCTAAATTGATTTCTAATCCTCAAATGGTGAAACTTCACTCTTTTGATACCAAGATTCACAAAGTTGATACACTGGTGTCTTACAAGAATGATGAGGATGAAGAAGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_151724.p1 GENE.S_Transcript_151724~~S_Transcript_151724.p1 ORF type:5prime_partial len:297 (+),score=61.71,HORMA|PF02301.14|8.7e-23 S_Transcript_151724:2-892(+)
GKKTEKTSRYYYPFSHFHFNSLHQSNKISSINKTINPTYIPPYLQLSYSHFLNPFPFINQPFEKKQKENPKKSVFFFFDLREILKGFLSMASKTVTKDIITLRGSAAIVSEFFGYAANSILYNRGVYPEESFVKVKKYGLPMLLTQDDGVKSFLANLTSQLSEWLEAGKLQRVVLVIMSKSTNEVLERWNFSIETDSEVVEKGVSREKSDKEIMREIQAIMRQIASSITYLPCLDEPCIFDVLAYTDKDVAAPFSWIESDPKLISNPQMVKLHSFDTKIHKVDTLVSYKNDEDEEE*

Click here to download the sequence:
Link to NCBI Protein BLAST