Transcript Information: S_Transcript_151819.p1


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23975676788451
Replicate 21.3913470892127
Replicate 31.0799800409316
Condition 2: 8 Hour
Replicate 11.6330253846453
Replicate 21.4108373016044
Replicate 31.2482253102016
Condition 3: 24 Hour
Replicate 12.3616090260102
Replicate 21.7355171026933
Replicate 31.2497409389922


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_151819.p1 GENE.S_Transcript_151819~~S_Transcript_151819.p1 ORF type:complete len:222 (+),score=26.57,RVT_1|PF00078.23|1.6e-41 S_Transcript_151819:3032-3697(+)
ATGCCAATTGCACTTTACAATGTATTATATAAAGCCATTACCAAGATCATGACTAATAGGGTCCAGCATGTTATGAATCATTTGGTGGGACAAGAACAGGCTGCTTTTGTGAAGGGTAGGCTATTATATGATAATGTTCTATTAGCACATGAATTAGCTCATCACTATAAGAGAAACCTCTCTCCCAGGGTTATTTTGAAGCTTGATATACAAAAAGCCTATAACACTGTTAGTTGGGAATTCATTGAAGTTTTGCTTACTAGCTTTGGGTTTCCTACTGAGTTTAGGAAAAGAGTGATGATGTGTATTACCTCTTCAAGATTTTCTATATATATAAATGGGTGGAATAAGGGGTATTTTAAAGGCCATTGTGGATTAAGACAGGGTGATCCCTTATCACCTTATCATTTTTGTGTTGTGTATGGAGGCTTTGTCAAGAATGTTAAGAAAGCTTATCATCAATCCAGGGTTTCACTACATCCTAAATGTGGAAGAGTTGGTCTTACACACCTTGTGTTTGCTGATGATTTGGTCATTTTTTCTAGGGGTGATAAATCTTTTGTGGTTGTTGCTGTGGACTGTGTTTCTCAATTCTCAAAGATGTCAGGTTTATTCATTAACCCTCACAAATCAAATATTTTCTTTGGTGGAGTAAGTAGGAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_151819.p1 GENE.S_Transcript_151819~~S_Transcript_151819.p1 ORF type:complete len:222 (+),score=26.57,RVT_1|PF00078.23|1.6e-41 S_Transcript_151819:3032-3697(+)
MPIALYNVLYKAITKIMTNRVQHVMNHLVGQEQAAFVKGRLLYDNVLLAHELAHHYKRNLSPRVILKLDIQKAYNTVSWEFIEVLLTSFGFPTEFRKRVMMCITSSRFSIYINGWNKGYFKGHCGLRQGDPLSPYHFCVVYGGFVKNVKKAYHQSRVSLHPKCGRVGLTHLVFADDLVIFSRGDKSFVVVAVDCVSQFSKMSGLFINPHKSNIFFGGVSRR*

Click here to download the sequence:
Link to NCBI Protein BLAST