Transcript Information: S_Transcript_15226.p1


Annotated TAIR IDAT3G06480.1
Annotated Gene NameDEAD box RNA helicase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:1985697-1989666 | Reverse length=1088
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.9935400071285
Replicate 28.2297707079619
Replicate 37.6112879075177
Condition 2: 8 Hour
Replicate 19.346313040225
Replicate 28.3253263897395
Replicate 37.9887435909322
Condition 3: 24 Hour
Replicate 17.0697286076262
Replicate 27.4346895118177
Replicate 38.0514815473122


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_15226.p1 GENE.S_Transcript_15226~~S_Transcript_15226.p1 ORF type:3prime_partial len:1134 (+),score=277.49,DEAD|PF00270.25|1.2e-48,DEAD|PF00270.25|2.8e+02,Helicase_C|PF00271.27|3.2e+02,Helicase_C|PF00271.27|1.9e-32,ResIII|PF04851.11|4e-07,ResIII|PF04851.11|5.9e+03,WW|PF00397.22|5.9e-07 S_Transcript_15226:169-3567(+)
ATGGCGGCAAATGTGGAAGCAGCAGCTTCGGCTGCTGCTGGTGGTCCACAGTATCTACCCGATGATCCGAGTCTTCCGAAGCCCTGGAAAGGATTGATTGATGGGAATACAGGGTATACGTATTACTGGAACCCGGAGACAAATGTCACTCAATATGAAAAGCCAGGTATTACTGCGCCCCCAGCAATGCCGTTGCCATCTGGTGTGTCTCCTACACATACAGCATCTCAGACAGGTCCACAACATGGGCAACAAACTCCTGAAGGCTCACAGTATCAGCAGCAGCATCAGTATATGAATCAGTTATCTCAGCAGCAACAACAAGGGCAGTTTCAAGTCCCGTTAACTGGACAGGCTGCTCAGCAGCAACAGCCAGCTCAAATGCCACAGGTTTCGGCAGCTGGGCAGCAAGGTCCTCATATGGGAGCCTTCCAGCACCAATTTGCACAATATGGACAAGGTATGCCTCAAAGAGGCTCCCAAGCCCCAGTGCAACAGGGGCAGATGATGCCACAGCAGTATATGCCACCTCAAACTGGCCAACAAATGTTGCCCCAACAAGGTTCACAGATGGGACAACAGCCTGCTCAGCATATGTCTCCCTTGGTGGGGTCACAAGCACCTCAGCACCAAGGCCCTCCTTCTCAAGTGGGACAATCCCAGGGCCATCCGTTTATGCCTCAGCATGTGCCATATGGTGGTGGTTATCAGCAGCCCATGATGCCACAGGGCGGCCAGCAAAATGCACCACCTTATTCTCAGCACATGCCTCAAGGACCTCCATTCTCATACCAGCAAGAAAATAGAAATGGAATTCCCCCACGAGATGATGCTGATTTCTCTAAAATGAAACAAACGGGGAGTTCAGTGTCTCAGTATGAGCAGAGTGGCCACGCCATCGGCCAAGGTCCACCATCTATGAATCTACCCAATCATTCAGTACAAGCTGGTCCGCTTTCTGGATCTTTTGGATCCTCCGTACATATGCATCAGCCTGCATCAAGTATTAATTTGCAGGAGAAACATAACGATGCTATCCACCCCCAACAGACTTCTGTGTATCCAAACCAAATGAAGCAACCCATGATGCATGCTCAGCAGCATGCCCCTCCCATTGGATCGAAGATGGGCTATGATGAAAACCAGCAGGGAAGAGCTGGTCAAGTATACAACTTCAATTCTAATAATGATGTCCCCGTAATGACTCCTCAACACCCTAAACTTGCTGTGATACCTACAACAAGGAAGCAGCAGGACATGATGATGGGTGGTTTCCCACATCAAAGTGCTGCACCTAGTCGTGATGCTGCTTTGAATCCGGTAGCTGCACCTGGCATGCATAGCATGTACAAGCATGGAAATGTGGATATGCCAATGTCCAACCACAATCTGTTGAGGCCTCCTCCTATGGTGCCTGGTTCAGCAGATGTTATGAGTATTTCATCAGCAGAGGCGTATCGTCAACAACATGAAGTAACAGCTACGGGTGAAAATGTTCCTGCTCCATTCATGACCTTTGAAGCCACTGGTTTTCCTCCGGAGTTACTGAGAGAGATACATTCTGCTGGCTTCTCTTCACCAACTCCAATTCAAGCACAAACTTGGCCTATCGCACTGCAAAACAGAGATATTGTGGCAATTGCAAAGACAGGTTCGGGGAAGACTTTGGGCTACTTGATGCCTGCCTTCATCCATCTGAGTCGTCGAAGGAATAATCCCCGGCATGGTCCAACAGTTTTGGTCTTGGCTCCGACTCGTGAGCTTGCCACTCAAATTCAAGATGAGGCTGTTAAATTTGGAAGATCATCAAGGGTTTCTTGCACGTGCTTATACGGTGGAGCTCCAAAGGGACCTCAGCTGGAGGAATTGCGTCGTGGAGCCGATATAGTAGTGGCAACTCCTGGCCGTCTCAATGATATTCTTGAAACACGGAATATTGATGTTCGGCAAGTTTCTTTGCTTGTTCTGGATGAGGCAGATCGAATGCTTGACATGGGTTTTGAGCCTCAAATTCGTAAGGTTGTGAATGAGATACCCGCACACAGGCAGACTCTTATGTACACAGCAACTTGGCCCAAAGAAGTCAGGAAAATAGCAAGTGATTTGCTTAATAGTCCTGTACAAGTGAACATTGGCAGTGTTGATGAACTCGTTGCAAACAAATCCATTACACAGCTTGTTGAAATTGTACCACAAATGGAGAAGCAAAGGCGCTTGGAGCAAATTCTTAGAGCCCAAGAGAGGGGTTCTAAAGTTATCATTTTCTGTTCCACCAAGAAAATGTGTGATGAGCTTACACGTAGTATTAGACGCAACTTTGCTGCTGCTGCAATTCATGGAGACAAGAATCAAGGGGAGAGAGACTATGTGTTGAATCAATTCCGTTCTGGGAAATCGCCAATTTTAGTAGCAACAGATGTTGCTGCCAGAGGCCTTGATGTAAAGGACATAAGGGTGGTGATCAATTATGATTTTCCAACTGGCATTGAAGATTATGTCCATCGTATTGGAAGAACCGGAAGGGCTGGGGCAACTGGGGTGGCATACACATTCATTTCAGAACAGGATTGGAAGCATGCTGGTGATCTGGTTAAAGTACTGGAGGGGGCTAACCAACAAGTTCCTCCAGAAGTGAGAGAAATGGCTCTAAGAGGTGGTCCAGCTTTTGGTAGGGATCGCATGAACCGATTTGACTCTGGCCCTGCTAGTGGTGGACGATGGGATTCTGGTGGGCGAAGTGGAGGGCGGGAGGGTGGCTTTAGTGGCCGTGGTGGCATGCGAGATGGTGGGTTTGGGGGTCGTGGCCCCATGAGGGATGGTGGATTTGGCTTCGGAGGTCGTGGCATGAGAGATGGGGGCTTTGGAGGTCGTGGCATGAGAGATGGTAATATTAGTGGCCGTGGAGGACGAAGTGATTTCGGTGGGCATGGAAATAGGGGAAGAGGATTTGGTGGTCCAGGTGGCAGTTATGGATCACGTCCTAGAGATGATTACAACTCCCAAGAGAGGTTCGGTAATAGAGATGGATTTGGCCGTGGCCGTGGTAGGGGGCGATTTGAGAGCAGGAGAGATGTGGCAGGGAGGAGCAGAGGAAGAAGTTACAGTTCTAGCCCTGAGAAAGTTCGAACCTGGGGTTATAGCAGAAGTATGAGCCGGAGCCGAAGTCGTTCTCGGAGTAGAAGTAGAAGCTGGAGCCGCAGTCCCCGCCGAAGTTACAGCCGCAGTCGCAGTCCCCGTCGAAGTTACAGTCGTAGTCCCCGTCGTAGCCGAAGCCGCAGCAACGATAGGTACCGTGGTCGTAGCCGAAGCCGCAGTCATGACAGGTATGGGAGGCCTGACAGGCGAGATTCCGATCAGAAAGATCTCTTTAGATCTGAAGTTGAGAAGCAATCAGACATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_15226.p1 GENE.S_Transcript_15226~~S_Transcript_15226.p1 ORF type:3prime_partial len:1134 (+),score=277.49,DEAD|PF00270.25|1.2e-48,DEAD|PF00270.25|2.8e+02,Helicase_C|PF00271.27|3.2e+02,Helicase_C|PF00271.27|1.9e-32,ResIII|PF04851.11|4e-07,ResIII|PF04851.11|5.9e+03,WW|PF00397.22|5.9e-07 S_Transcript_15226:169-3567(+)
MAANVEAAASAAAGGPQYLPDDPSLPKPWKGLIDGNTGYTYYWNPETNVTQYEKPGITAPPAMPLPSGVSPTHTASQTGPQHGQQTPEGSQYQQQHQYMNQLSQQQQQGQFQVPLTGQAAQQQQPAQMPQVSAAGQQGPHMGAFQHQFAQYGQGMPQRGSQAPVQQGQMMPQQYMPPQTGQQMLPQQGSQMGQQPAQHMSPLVGSQAPQHQGPPSQVGQSQGHPFMPQHVPYGGGYQQPMMPQGGQQNAPPYSQHMPQGPPFSYQQENRNGIPPRDDADFSKMKQTGSSVSQYEQSGHAIGQGPPSMNLPNHSVQAGPLSGSFGSSVHMHQPASSINLQEKHNDAIHPQQTSVYPNQMKQPMMHAQQHAPPIGSKMGYDENQQGRAGQVYNFNSNNDVPVMTPQHPKLAVIPTTRKQQDMMMGGFPHQSAAPSRDAALNPVAAPGMHSMYKHGNVDMPMSNHNLLRPPPMVPGSADVMSISSAEAYRQQHEVTATGENVPAPFMTFEATGFPPELLREIHSAGFSSPTPIQAQTWPIALQNRDIVAIAKTGSGKTLGYLMPAFIHLSRRRNNPRHGPTVLVLAPTRELATQIQDEAVKFGRSSRVSCTCLYGGAPKGPQLEELRRGADIVVATPGRLNDILETRNIDVRQVSLLVLDEADRMLDMGFEPQIRKVVNEIPAHRQTLMYTATWPKEVRKIASDLLNSPVQVNIGSVDELVANKSITQLVEIVPQMEKQRRLEQILRAQERGSKVIIFCSTKKMCDELTRSIRRNFAAAAIHGDKNQGERDYVLNQFRSGKSPILVATDVAARGLDVKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFISEQDWKHAGDLVKVLEGANQQVPPEVREMALRGGPAFGRDRMNRFDSGPASGGRWDSGGRSGGREGGFSGRGGMRDGGFGGRGPMRDGGFGFGGRGMRDGGFGGRGMRDGNISGRGGRSDFGGHGNRGRGFGGPGGSYGSRPRDDYNSQERFGNRDGFGRGRGRGRFESRRDVAGRSRGRSYSSSPEKVRTWGYSRSMSRSRSRSRSRSRSWSRSPRRSYSRSRSPRRSYSRSPRRSRSRSNDRYRGRSRSRSHDRYGRPDRRDSDQKDLFRSEVEKQSDM

Click here to download the sequence:
Link to NCBI Protein BLAST