Transcript Information: S_Transcript_15230.p2


Annotated TAIR IDAT3G06480.1
Annotated Gene NameDEAD box RNA helicase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:1985697-1989666 | Reverse length=1088
E-Value7E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8757638697356
Replicate 24.1620280667107
Replicate 35.0666857372529
Condition 2: 8 Hour
Replicate 14.1010365994487
Replicate 23.9744859305009
Replicate 34.0992014624964
Condition 3: 24 Hour
Replicate 14.5610196299043
Replicate 21.8263877460793
Replicate 33.0488185544646


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_15230.p2 GENE.S_Transcript_15230~~S_Transcript_15230.p2 ORF type:complete len:546 (+),score=141.19,WW|PF00397.22|2.5e-07 S_Transcript_15230:169-1806(+)
ATGGCGGCAAATGTGGAAGCAGCAGCTTCGGCTGCTGCTGGTGGTCCACAGTATCTACCCGATGATCCGAGTCTTCCGAAGCCCTGGAAAGGATTGATTGATGGGAATACAGGGTATACGTATTACTGGAACCCGGAGACAAATGTCACTCAATATGAAAAGCCAGGTATTACTGCGCCCCCAGCAATGCCGTTGCCATCTGGTGTGTCTCCTACACATACAGCATCTCAGACAGGTCCACAACATGGGCAACAAACTCCTGAAGGCTCACAGTATCAGCAGCAGCATCAGTATATGAATCAGTTATCTCAGCAGCAACAACAAGGGCAGTTTCAAGTCCCGTTAACTGGACAGGCTGCTCAGCAGCAACAGCCAGCTCAAATGCCACAGGTTTCGGCAGCTGGGCAGCAAGGTCCTCATATGGGAGCCTTCCAGCACCAATTTGCACAATATGGACAAGGTATGCCTCAAAGAGGCTCCCAAGCCCCAGTGCAACAGGGGCAGATGATGCCACAGCAGTATATGCCACCTCAAACTGGCCAACAAATGTTGCCCCAACAAGGTTCACAGATGGGACAACAGCCTGCTCAGCATATGTCTCCCTTGGTGGGGTCACAAGCACCTCAGCACCAAGGCCCTCCTTCTCAAGTGGGACAATCCCAGGGCCATCCGTTTATGCCTCAGCATGTGCCATATGGTGGTGGTTATCAGCAGCCCATGATGCCACAGGGCGGCCAGCAAAATGCACCACCTTATTCTCAGCACATGCCTCAAGGACCTCCATTCTCATACCAGCAAGAAAATAGAAATGGAATTCCCCCACGAGATGATGCTGATTTCTCTAAAATGAAACAAACGGGGAGTTCAGTGTCTCAGTATGAGCAGAGTGGCCACGCCATCGGCCAAGGTCCACCATCTATGAATCTACCCAATCATTCAGTACAAGCTGGTCCGCTTTCTGGATCTTTTGGATCCTCCGTACATATGCATCAGCCTGCATCAAGTATTAATTTGCAGGAGAAACATAACTATGCTATCCACCCCCAACAAGCTTCCGTGTATCCAAACCAAATGAAGCAACCCATGATGCATGCTCAGCAGCATGCCCCTCCCATTGGATCGAAGATGGGCTATGATGAAAACCAGCAGGGAAGAGCTGGTCAAGTATACAACTTCAATTCTAATAATGATGTCCCCGTAATGACTCCTCAACACCCTAAACTTGCTGTGATACCTACAACAAGGAAGCAGCAGGACATGATGATGGGTGGTTTCCCACATCAAAGTGCTGCACCTAGTCGTGATGCTGCTTTGAATCCGGTAGCTGCACCTGGCATGCATAGCATGTACAAGCATGGAAATGTGGATATGCCAATGTCCAACCACAATCTGTTGAGGCCTCCTCCTATGGTGCCTGGTTCAGCAGATGTTATGAGTATTTCATCAGCAGAGGCGTATCGTCAACAACATGAAGTAACAGCTACGGGTGAAAATGTTCCTGCTCCATTCATGACCTTTGAAGCCACTGGTTTTCCTCCGGAGTTACTGAGAGAGGTGCGATATCTGCTCCGGTGGGGAGCATATGTCGTACGCTGCACTGATATGCGCACAATTTACATGCAACAAGTATTCCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_15230.p2 GENE.S_Transcript_15230~~S_Transcript_15230.p2 ORF type:complete len:546 (+),score=141.19,WW|PF00397.22|2.5e-07 S_Transcript_15230:169-1806(+)
MAANVEAAASAAAGGPQYLPDDPSLPKPWKGLIDGNTGYTYYWNPETNVTQYEKPGITAPPAMPLPSGVSPTHTASQTGPQHGQQTPEGSQYQQQHQYMNQLSQQQQQGQFQVPLTGQAAQQQQPAQMPQVSAAGQQGPHMGAFQHQFAQYGQGMPQRGSQAPVQQGQMMPQQYMPPQTGQQMLPQQGSQMGQQPAQHMSPLVGSQAPQHQGPPSQVGQSQGHPFMPQHVPYGGGYQQPMMPQGGQQNAPPYSQHMPQGPPFSYQQENRNGIPPRDDADFSKMKQTGSSVSQYEQSGHAIGQGPPSMNLPNHSVQAGPLSGSFGSSVHMHQPASSINLQEKHNYAIHPQQASVYPNQMKQPMMHAQQHAPPIGSKMGYDENQQGRAGQVYNFNSNNDVPVMTPQHPKLAVIPTTRKQQDMMMGGFPHQSAAPSRDAALNPVAAPGMHSMYKHGNVDMPMSNHNLLRPPPMVPGSADVMSISSAEAYRQQHEVTATGENVPAPFMTFEATGFPPELLREVRYLLRWGAYVVRCTDMRTIYMQQVFL*

Click here to download the sequence:
Link to NCBI Protein BLAST