Transcript Information: S_Transcript_152339.p1


Annotated TAIR IDAT4G13650.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:7939611-7942898 | Reverse length=1064
E-Value2E-93
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1916269209782
Replicate 20.65859073306014
Replicate 30.97871899614464
Condition 2: 8 Hour
Replicate 13.5011834849024
Replicate 25.0828246494901
Replicate 33.8531134144991
Condition 3: 24 Hour
Replicate 11.0505831197798
Replicate 20.82687206414534
Replicate 31.7567593117991


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_152339.p1 GENE.S_Transcript_152339~~S_Transcript_152339.p1 ORF type:complete len:603 (+),score=89.24,PPR_2|PF13041.2|0.31,PPR_2|PF13041.2|4.2e-10,PPR_2|PF13041.2|4.2e+02,PPR_2|PF13041.2|3.1e-06,PPR_2|PF13041.2|74,PPR_2|PF13041.2|2.3e-08,PPR_2|PF13041.2|0.089,PPR_2|PF13041.2|2.7e-07,PPR_2|PF13041.2|1.1e+02,PPR_2|PF13041.2|4.6e+02,PPR|PF01535.16|0.23,PPR|PF01535.16|4e-06,PPR|PF01535.16|5.6,PPR|PF01535.16|0.00078,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|5.4e-07,PPR|PF01535.16|0.0015,PPR|PF01535.16|0.00013,PPR|PF01535.16|0.017,PPR|PF01535.16|11,PPR|PF01535.16|1.3e+04,PPR_1|PF12854.3|43,PPR_1|PF12854.3|0.0023,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|0.66,PPR_1|PF12854.3|2.4e-05,PPR_1|PF12854.3|2.1,PPR_1|PF12854.3|0.034,PPR_1|PF12854.3|78,PPR_1|PF12854.3|4.1,PPR_3|PF13812.2|4.9,PPR_3|PF13812.2|0.00052,PPR_3|PF13812.2|5.1e+03,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|7.6e+03,PPR_3|PF13812.2|6.7e+03,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|0.51,PPR_3|PF13812.2|0.65,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|2.6e+02,PPR_3|PF13812.2|1.6e+04 S_Transcript_152339:79-1887(+)
ATGCGAAGGGTACTAATATTAAACAACCAGCTATATAGATGTTCAATCAGGGAGCGCTCAGATCACATTTTCTCTCTCTATTCAGATGCCAACACCAGGTTTAGCTCATTCTACCATTCTGAGAGGAACCCATTCCTACCATTTGTTCAATCTCACATGCAAGGAAATGGTTCTGTTTATCACCATCTTAACCATATCCTACAACAATGCGCCTTTTCTTCGGATTTACGAACTGGGAAATCAGTCCATTGCCTTCTTCTTAAACAAAACTTTGGTGGGTTTGTTCCGATTTGGAACCAGCTTCTCAAGATATGTCTCAACCACGGTGGGTTCGACATTGCCTGCCAGGTGTTTGATCAAATGCCTCAAAGAGATGTAGTCACTTATAACACTCTGATTTCTGCTAATGTTCGTTTTGGTAACTGTCATAAAGCTATTTATCTTTATTCAATGATGAAAGAAGAGGATGTTTTTCCCAATCATATAACACTCGCCAGCTTGATTCGTTCGGCGTGGTTTGGGAGTACATTGCATTCCCAAGTTATTCGTTATGGGTTGGGTAGCAATCGCTTCGTTGGGAGCTCAATGGTTGAAGTTTATGCAAAAGAAAGAAGATTGTGTGATGCTATTAGAGCATTCAGTGAGATATCGGAATTGGATTTGGTGTCATGGAATATTATGATAGATGGTTGTGCTACAAACAAGAGCAGAGAGCATGCCTTGAGATTTTTCACAAACATGATAAGTGAAAATGTTGGCTATGATGGGTTCACCTTGACTAGTGTGCTTAAAACATTTTCTGAACCTAGAGATTTGTTTTGGGGAATGTTGCTGCATGGTGTTGCTACTAAAGCTGGTCTGGTATTCGAAATACCTATGAATAATGCCTTGATAACCATGTACTCGAAATGCGAGGAAGGAATGTTATCGGCAAAAAAGATCTTTTCTGAGATTGTGGTACCTAATATTATCTCCTGGACAGCAATGATTGCTGGTTTGATGCAAAATGGGAAAAATGAAGAGGCAATTGGGTTCTACAGAAAAATGCTTGAATCAGGTGTTAACGAGAACCATTTTAGCTTTGCTAGCATCCTTCCCGCATATGGTGACTTGGCAAATCTTGAGCATGGAAGGCTAATGCATGGGAGGATTCTGAAGTCCCCATTCAGCACAGATGTATCTGTGAATAACGCGTTGATAGACATGTATTCAAAATGTGGCAGCTTACAAGATGCCCACTCATTGTTCTTGTCGATGAGACTCCATGATGTGGTTTCATACTCCACATTGATTGCATGTTTCGGACAGCATGGTAAGGGAACAGAAGCTCTTGGTGCTCTACAGGATATGATGAAAGCAAATTTAATTCCAGATGATGTTACATTCCTTGGCTGCCTCTCTGCTTGTAGCCATTCTGGTCTCATGGATGAAGGCATCGAGATCTTTAGACTGATGGTTGATGTTTACAATCAAAAGCCAAGAAGAGAGCATATCTCTTGTGTTGTAGATTTGTTGGGTCGTGCAGGCAGGCTAAATGAGGCCGAGGCTTTTATTGAAGAGACGGGCATTGAGTCTGATGTCTCAGCATGGGAAACACTGCTAGGTGCCTGTAGGATTCATGGAGAAATGACCGTGGGAGAAAAAGCTGCTAAAAGAATCATAGAAATGCAACCAGAGAAACACGAACCGTATGTGTTGCTAGCCAATCTTTATGCTGCAAGTGAATTATGGGAAGACAAAGAGGTGCTGAGGGAAAGATCTGGTGGTGAGGGGCTAAAAGCAGAGGTAGGCCGCAGCTGGGTAGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_152339.p1 GENE.S_Transcript_152339~~S_Transcript_152339.p1 ORF type:complete len:603 (+),score=89.24,PPR_2|PF13041.2|0.31,PPR_2|PF13041.2|4.2e-10,PPR_2|PF13041.2|4.2e+02,PPR_2|PF13041.2|3.1e-06,PPR_2|PF13041.2|74,PPR_2|PF13041.2|2.3e-08,PPR_2|PF13041.2|0.089,PPR_2|PF13041.2|2.7e-07,PPR_2|PF13041.2|1.1e+02,PPR_2|PF13041.2|4.6e+02,PPR|PF01535.16|0.23,PPR|PF01535.16|4e-06,PPR|PF01535.16|5.6,PPR|PF01535.16|0.00078,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|5.4e-07,PPR|PF01535.16|0.0015,PPR|PF01535.16|0.00013,PPR|PF01535.16|0.017,PPR|PF01535.16|11,PPR|PF01535.16|1.3e+04,PPR_1|PF12854.3|43,PPR_1|PF12854.3|0.0023,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|0.66,PPR_1|PF12854.3|2.4e-05,PPR_1|PF12854.3|2.1,PPR_1|PF12854.3|0.034,PPR_1|PF12854.3|78,PPR_1|PF12854.3|4.1,PPR_3|PF13812.2|4.9,PPR_3|PF13812.2|0.00052,PPR_3|PF13812.2|5.1e+03,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|7.6e+03,PPR_3|PF13812.2|6.7e+03,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|0.51,PPR_3|PF13812.2|0.65,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|2.6e+02,PPR_3|PF13812.2|1.6e+04 S_Transcript_152339:79-1887(+)
MRRVLILNNQLYRCSIRERSDHIFSLYSDANTRFSSFYHSERNPFLPFVQSHMQGNGSVYHHLNHILQQCAFSSDLRTGKSVHCLLLKQNFGGFVPIWNQLLKICLNHGGFDIACQVFDQMPQRDVVTYNTLISANVRFGNCHKAIYLYSMMKEEDVFPNHITLASLIRSAWFGSTLHSQVIRYGLGSNRFVGSSMVEVYAKERRLCDAIRAFSEISELDLVSWNIMIDGCATNKSREHALRFFTNMISENVGYDGFTLTSVLKTFSEPRDLFWGMLLHGVATKAGLVFEIPMNNALITMYSKCEEGMLSAKKIFSEIVVPNIISWTAMIAGLMQNGKNEEAIGFYRKMLESGVNENHFSFASILPAYGDLANLEHGRLMHGRILKSPFSTDVSVNNALIDMYSKCGSLQDAHSLFLSMRLHDVVSYSTLIACFGQHGKGTEALGALQDMMKANLIPDDVTFLGCLSACSHSGLMDEGIEIFRLMVDVYNQKPRREHISCVVDLLGRAGRLNEAEAFIEETGIESDVSAWETLLGACRIHGEMTVGEKAAKRIIEMQPEKHEPYVLLANLYAASELWEDKEVLRERSGGEGLKAEVGRSWVA*

Click here to download the sequence:
Link to NCBI Protein BLAST