Transcript Information: S_Transcript_152479.p1


Annotated TAIR IDATCG00190.1
Annotated Gene NameRNA polymerase subunit beta
Annotated Gene Symbol(s)RPOB
Annotation TypeOrtholog
Chromosome PositionchrC:23111-26329 | Reverse length=1072
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.506485445776
Replicate 23.5030055843408
Replicate 36.5928072350847
Condition 2: 8 Hour
Replicate 16.0590245469291
Replicate 29.0567558095829
Replicate 311.182408446439
Condition 3: 24 Hour
Replicate 13.8943524885739
Replicate 24.6295622532929
Replicate 37.8921346003009


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_152479.p1 GENE.S_Transcript_152479~~S_Transcript_152479.p1 ORF type:complete len:1077 (+),score=71.55,RNA_pol_Rpb2_6|PF00562.24|4.5,RNA_pol_Rpb2_6|PF00562.24|2.5e-125,RNA_pol_Rpb2_2|PF04561.10|3.4e-55,RNA_pol_Rpb2_3|PF04565.12|2.5e-24,RNA_pol_Rpb2_7|PF04560.16|4.7e-21,RNA_pol_Rpb2_1|PF04563.11|1.4e-11 S_Transcript_152479:883-4113(+)
ATGGGGAATAAAGTTCAAATGCTACGGGATGGAAATGAGGGAATGTCTACAATACCTGGGTTTAATCAGATTCAATTGGAAGGATTTTGTAGGTTCATTGATCAAGGCTTAACGGAAGAACTTTATAAGTTTCCAAAAATTGAAGATACAGATCAAGAAATTGAATTTCAATTATTTGTGGAAACATATCAATTGGTGGAACCCTTGATAAAAGAAAAGGATGCTGTGTATGAATCACTTACATATTCTTCTGAATTATATGTATCCGCGGGATTAATTTGGAAAACCAGTAGGGAGATGCAAGAACAAACAATTTTGATTGGAAACATTCCTCTAATGAATTCCCTGGGAACTTTTATAGTCAATGGAATATACAGAATTGTGATCAATCAAATATTGCAAAGCCCCGGTATTTATTACCGGTCAGAATTGGACCATAACGGAATTTCGGTCTATACCGGTACCATAATATCAGATTGGGGAGGAAGATTCGAATTAGAGATTGATAGAAAAGCAAGGATATGGGCTCGTGTGAGTAGGAAACAAAAAATTTCTATTCTAGTTCTATTATCAGCTATGGGTTTGAATCTAAGAGAAATTCTGGATAATGTTTGCTATCCGGAAATTTTCTTGTCTTTCCTGAATGATAAAGAGAAAAAAAAAATTGGGTCAAAAGAAAATGCTATTTTGGAGTTTTATCAACAATTTGCTTGTGTGGGTGGGGACCCGGTATTTTCGGAATCCTTATGTAAGGAATTACAAAAAAAATTCTTTCAACAAAGATGCGAATTAGGAAAAATTGGTCGACGAAATATGAACCGGAGACTGAACCTTGATATATCTCAAAACAATACATTTTTGTTACCGCGAGATATATTGGCAGCTGCAGATCATTTGATTGGAATGAAATTTGGAATGGGTACACTTGATGATATGAATCATTTGAAAAATAAGCGTATTCGTTCTGTAGCGGATCTCTTACAAGATCAATTCGGATTAGCTCTGGTTCGTTTAGAAAATGTGGTTCGAGGAACTATATCCGGAGCAATTAGGCATAAATTAATACCGACTCCTCAAAATTTGGTAACTTCAACTCCATTAACAACGACTTATGAATCTTTTTTTGGGTTACACCCATTATCTCAAGTTTTGGATCGAACTAATCCATTAACACAAATAGTGCATGGGAGGAAATTGAGTTATTTGGGCCCTGGGGGGTTGACAGGGCGAACTGCTAGTTTTCGGATACGAGATATCCATCCTAGTCACTATGGACGTATTTGCCCAATTGACACGTCTGAAGGAATCAATGTTGGACTTATTGGATCTTTAGCAATTCATGCGAGGATTGGTCCTTGGGGGTCTCTAGAAAGCCCTTTTTATGAAATTTCTGAGAAATCAAAAAGGATACAGATGCTTTTTTTATCACCAAGCAGAGATGAGTACTATATGGTAGCTGCGGGAAATTCTTTAGCCCTGAATCAAGGTATTCAGGAAGAACAGGTTGTTCCAGCTCGGTACCGTCAAGAATTCCTGACTATTGCATGGGAGCAGGTTCATCTTCGAAGTATTTTTACCTTCCAATATTTTTCTATTGGAGCTTCTCTCATTCCTTTTATCGAGCACAATGATGCAAATCGAGCTTTAATGAGTTCTAATATGCAACGTCAAGCAGTTCCGCTTTCTCGGTCCGAGAAGTGCATTGTTGGAACTGGGTTGGAACGTCAAGCAGCCCTAGATTCGGGGGTTCTTGCTATAGCCGAACATGAAGGAAAGATCGTTTATACCGATACTGATAAGATCATTTTATCAGGTAATGGGGATACTCTAAGCATTCCATTAGTTATGTATCAACGTTCCAACAAAAATACTTGTATGCACCAAAAACCCCGGATTCCACGGGGTAAATGCATTAAAAAAGGACAAATTTTAGCAGACGGTGCTGCTACAGTTGGCGGCGAACTAGCTTTGGGAAAAAACGTATTAGTAGCTTATATGCCATGGGAAGGTTACAATTTTGAAGATGCAGTACTCATTAGTGAGCGTCTTGTATATGAAGATATTTATACTTCTTTTCACATACGGAAATATGAAATTCAGACTTATGTGACAAGTCAAGGCCCCGAAAGAGTCACTAGTGAAATACCCCATTTAGAGGCCCATTTACTCCGCAATTTAGACAAAAATGGAATTGTGAGGCTGGGATCATGGGTCGAAACTGGGGATATTTTGGTAGGTAAATTAACCCCTCAGATAGCAAAAGAGTCATCGTATGCTCCAGAAGATAGATTATTACGGGCCATACTTGGCATTCAGGTATCCACATCAAAGGAAACTTGTCTAAAACTACCTATAGGCGGTAGGGGTCGAGTTGTTGATGTAAGATGGATCCAGAAAAAGGGGGGTTCTAGTTATAATCCAGAAACGATTCATGTTTATGTTTTACAGAAACGCGAAATCAAAGTAGGCGATAAAGTAGCCGGACGACATGGAAATAAAGGTATCATTTCCAAAATTTTGCCTAGACAAGATATGCCTTATTTGCAAGATGGAAGACCCGTTGATATGGTCTTTAACCCATTAGGAGTACCTTCACGAATGAATGTCGGACAGATATTTGAATGTTCGCTCGGGTTAGCGGGGGGTCTGCTAGATAGACATTATCGAATAGCACCTTTTGATGAGAGATATGAACAAGAGGCTTCGAGAAAACTAGTGTTTTCTGAATTATATGAAGCCAGTAAGCAAACATCGAATCCGTGGGTATTTGAACCCGAGTATCCGGGAAAGAGCCGAATATTTGATGGAAGAACAGGAGATCCTTTTGAACAACCTGTTATAATAGGAAATCCTTATATATTGAAATTAATTCATCAAGTTGATGATAAAATCCATGGACGTTCTAGTGGACATTATGCACTTGTTACACAACAACCCCTTAGAGGAAGAGCCAAGCAAGGAGGACAGCGGGTAGGAGAAATGGAGGTTTGGGCTCTAGAAGGATTTGGTGTTGCTCATATTTTACAAGAGATGCTTACTTATAAATCGGATCATATTAAAGCTCGCCAGGAAGTACTTGGTATTACGATCATTGGGGGAACAATACCTACCCCCGAGGATGCTCCAGAATCTTTTCGACTGCTCGTTCGAGAATTACGATCTTTGGCTTTGGAACTGAATCATTTCCTTGTATCTGAGAAGAACTTCCAGATTAATGGGATGGAAGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_152479.p1 GENE.S_Transcript_152479~~S_Transcript_152479.p1 ORF type:complete len:1077 (+),score=71.55,RNA_pol_Rpb2_6|PF00562.24|4.5,RNA_pol_Rpb2_6|PF00562.24|2.5e-125,RNA_pol_Rpb2_2|PF04561.10|3.4e-55,RNA_pol_Rpb2_3|PF04565.12|2.5e-24,RNA_pol_Rpb2_7|PF04560.16|4.7e-21,RNA_pol_Rpb2_1|PF04563.11|1.4e-11 S_Transcript_152479:883-4113(+)
MGNKVQMLRDGNEGMSTIPGFNQIQLEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQLFVETYQLVEPLIKEKDAVYESLTYSSELYVSAGLIWKTSREMQEQTILIGNIPLMNSLGTFIVNGIYRIVINQILQSPGIYYRSELDHNGISVYTGTIISDWGGRFELEIDRKARIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGKIGRRNMNRRLNLDISQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENVVRGTISGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGPWGSLESPFYEISEKSKRIQMLFLSPSRDEYYMVAAGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHLRSIFTFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGVLAIAEHEGKIVYTDTDKIILSGNGDTLSIPLVMYQRSNKNTCMHQKPRIPRGKCIKKGQILADGAATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPERVTSEIPHLEAHLLRNLDKNGIVRLGSWVETGDILVGKLTPQIAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVVDVRWIQKKGGSSYNPETIHVYVLQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQTSNPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGNPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIKARQEVLGITIIGGTIPTPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINGMEA*

Click here to download the sequence:
Link to NCBI Protein BLAST