Transcript Information: S_Transcript_152480.p2


Annotated TAIR IDATCG00180.1
Annotated Gene NameDNA-directed RNA polymerase family protein
Annotated Gene Symbol(s)RPOC1
Annotation TypeOrtholog
Chromosome PositionchrC:20251-23084 | Reverse length=680
E-Value5.9E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.684640726977
Replicate 22.8219847108449
Replicate 311.151421817991
Condition 2: 8 Hour
Replicate 17.1911199906611
Replicate 212.616682081706
Replicate 323.794434535793
Condition 3: 24 Hour
Replicate 15.3342157360753
Replicate 26.8518500114539
Replicate 318.036694545519


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_152480.p2 GENE.S_Transcript_152480~~S_Transcript_152480.p2 ORF type:3prime_partial len:172 (+),score=-4.96,RNA_pol_Rpb1_1|PF04997.8|3.6e-18 S_Transcript_152480:4140-4652(+)
ATGATTGATCAGTATAAACATCAACAACTCCGAATTGGATTAGTTTCTCCTCAACAAATAAGTGCTTGGGCCACAAAAATTCTACCTAATGGAGAGATAGTTGGAGAGGTGACAAAACCTTATACTTTTCATTACAAAACCAATAAACCAGAAAAAGATGGATTATTTTGTGAAAGAATTTTTGGTCCTATAAAAAGTGGAATTTGCGCTTGTGGAAATTATCGAGTAATCGGAGATGAAAAAGAAGACCAAAAGTTTTGTGAACAATGCGGAGTCGAGTTTGTTGATTCTCGAATACGAAGGTATCAAATGGGCTATATTAAATTGGCATGCCCGGTAACCCACGTGTGGTATTTGAAACGTCTTCCTAGTTATATCGCGAATTTTTTAGATAAACCTCTTAAAGAATTAGAGGGCCTAGTATATTGCGATTTTTCATTTGCTAGGCCCATAGCCAAAAAACCCACTTTTTTACGATTACGAGGTTTATTCGAATATGAAATCCAATCCTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_152480.p2 GENE.S_Transcript_152480~~S_Transcript_152480.p2 ORF type:3prime_partial len:172 (+),score=-4.96,RNA_pol_Rpb1_1|PF04997.8|3.6e-18 S_Transcript_152480:4140-4652(+)
MIDQYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGDEKEDQKFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANFLDKPLKELEGLVYCDFSFARPIAKKPTFLRLRGLFEYEIQSW

Click here to download the sequence:
Link to NCBI Protein BLAST