Transcript Information: S_Transcript_152537.p1


Annotated TAIR IDAT5G59950.5
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24140235-24141504 | Forward length=245
E-Value1.2E-88
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 199.798754631927
Replicate 293.399142460146
Replicate 395.671693433678
Condition 2: 8 Hour
Replicate 1107.78207689451
Replicate 299.741158518781
Replicate 3103.02659675741
Condition 3: 24 Hour
Replicate 181.281170654586
Replicate 291.882869432442
Replicate 380.395266541308


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_152537.p1 GENE.S_Transcript_152537~~S_Transcript_152537.p1 ORF type:complete len:240 (+),score=57.12,RRM_1|PF00076.18|1.4e-14,RRM_6|PF14259.2|1.1e-11,RRM_5|PF13893.2|3.2e-06,FoP_duplication|PF13865.2|1.4e+02,FoP_duplication|PF13865.2|2.4e-06 S_Transcript_152537:145-864(+)
ATGGAGAATCGTTTAAACATGTCACTCGACGATCTCATTAAGATGAATAAATCTTCTTCAGGCCGTGGTGGTGGTAGAGGTCGAGGCCGCTCCGGTCCCGGTCCTTCCCGCCGGTTCACTAATCGAGCCGCCAACCGGTCCGCCCCCTACTCTATGTCTAAGGCACCGGATACGTTTTGGCAGCATGATATGTATGCTAATCAAGGTGGTGGTATTGGTATTGGTGGTGGTGGTGGAGCTTCTTCGATTGAGACTGGAACTAAGCTTTACATATCTAACTTGGATTACGGCGTTTCTAATGATGATATTAAGGAGCTCTTTTCAGAAGTTGGTGACTTGAAACGATATGGCATCCATTATGATAGGAGTGGAAGGTCTAAGGGAACTGCCGAAGTTGTTTTCTCTCGGAGGGGTGATGCTGTAGCAGCTGTCAAGAGGTATAACAATGTGGAACTTGATGGGAAGCCTATGAAAATTGAGATAGTGGGTACAAACATCGCAGCTCAAGGAGCACTTCCTCCTGTTCTCAATGGCGCTCCAAGAAAGCAGTTTGGAGGCCCCAGAGGTGGTGGAAGGGGCAGTGCGATGGGACGCCTACGTGGAGGTCGTGGCTTTGGGAGAGGCCGTGGCCGGGGAAGGGGTCGTGATGAAAAGGTTTCTGCAGAAGACCTGGATGCTGACTTAGACAAATATCACTCAGAAGCAATGCAGACAAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_152537.p1 GENE.S_Transcript_152537~~S_Transcript_152537.p1 ORF type:complete len:240 (+),score=57.12,RRM_1|PF00076.18|1.4e-14,RRM_6|PF14259.2|1.1e-11,RRM_5|PF13893.2|3.2e-06,FoP_duplication|PF13865.2|1.4e+02,FoP_duplication|PF13865.2|2.4e-06 S_Transcript_152537:145-864(+)
MENRLNMSLDDLIKMNKSSSGRGGGRGRGRSGPGPSRRFTNRAANRSAPYSMSKAPDTFWQHDMYANQGGGIGIGGGGGASSIETGTKLYISNLDYGVSNDDIKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVELDGKPMKIEIVGTNIAAQGALPPVLNGAPRKQFGGPRGGGRGSAMGRLRGGRGFGRGRGRGRGRDEKVSAEDLDADLDKYHSEAMQTN*

Click here to download the sequence:
Link to NCBI Protein BLAST