Transcript Information: S_Transcript_152604.p1


Annotated TAIR IDAT1G16080.1
Annotated Gene Nameunknown protein; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 81 Blast hits to 81 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5514394-5515761 | Forward length=313
E-Value3.1E-176
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1153.96303599199
Replicate 2181.9472997804
Replicate 3197.07718622668
Condition 2: 8 Hour
Replicate 1178.12168963605
Replicate 2177.39728697014
Replicate 3193.48230902983
Condition 3: 24 Hour
Replicate 1188.34210445416
Replicate 2210.87514425044
Replicate 3196.3600828847


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_152604.p1 GENE.S_Transcript_152604~~S_Transcript_152604.p1 ORF type:complete len:312 (+),score=86.97 S_Transcript_152604:207-1142(+)
ATGGCCAATCTCTTCACTCTTTCTCCCTGTACTAGTGCACAATTCTACCACAAAATCATACCCATTTCTAGAGTCCCAAGAACTGCTTGGCAACCCCATTTGAGAGCACATTCTAGAATCTCAGCTATGGCTACTGATACAACTAAGGTTAAGGTCCTTCCAGCCATTATAGTTGGGGGTGGTCGTGTTGGAAAGGCTTTACAAGACATGGGAAATGGTGAAGATTTGTTGGTTAAGAGAGGGGAATCTATTCCACTTGATTTTAGTGGTCCCATTTTGGTTTGTACTAGGAATGATGATCTTGAAGCTGTTCTTCAAGCTACCCCTCAGTCTCGCTGGAGCGATTTGGTCTTTTTCCAGAATGGGATGCTGGAACCATGGTTTGAAAGTAAAGGTCTTGGCGATGTGGACCAAGTTTTGGCATATTTTGCTGTGTCTAAGCTCGGAGAACCCCCAGTTGATGGGAAGACTGACACTAATCCCGAAGGACTTACAGCAGCATATGGCAAATGGGCTTCTGCTGTGGCAGAAAGATTAAATGCTGGAGGCCTTTCTTGTAAGGTACTAGATAAGGAAGCTTTTCAGAAGCAGATGTTGGAGAAACTGATATGGATTTGTGCGTTTATGCTTGTTGGAGCTCGTCATCCTGGTGCCACCGTGGGTGCTGTAGAAAAGGGCTACAGATCTGAGGTGTCCAGCCTTATTGCAGAACTTGCGTCTGCTGCTGCAGCAGAAAAAGGTATTGTTTTTGATGAAGGGATGGAAGAGAGATTATGTGCATATTCACGTGCTGTAGCACACTTCCCAACAGCAGTGAAGGAGTTTAAGTGGAGGAATGGGTGGTTCTATTCACTCTCAGAGAAGGCAATTGCTGAAGGGAAACCAGACCCTTGCCCTTTGCACACGGAATGGCTCAAGGAACTGAAGGTTGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_152604.p1 GENE.S_Transcript_152604~~S_Transcript_152604.p1 ORF type:complete len:312 (+),score=86.97 S_Transcript_152604:207-1142(+)
MANLFTLSPCTSAQFYHKIIPISRVPRTAWQPHLRAHSRISAMATDTTKVKVLPAIIVGGGRVGKALQDMGNGEDLLVKRGESIPLDFSGPILVCTRNDDLEAVLQATPQSRWSDLVFFQNGMLEPWFESKGLGDVDQVLAYFAVSKLGEPPVDGKTDTNPEGLTAAYGKWASAVAERLNAGGLSCKVLDKEAFQKQMLEKLIWICAFMLVGARHPGATVGAVEKGYRSEVSSLIAELASAAAAEKGIVFDEGMEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAEGKPDPCPLHTEWLKELKVV*

Click here to download the sequence:
Link to NCBI Protein BLAST