Transcript Information: S_Transcript_152749.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.50531015003507
Replicate 20.13963790859187
Replicate 31.0505355996988
Condition 2: 8 Hour
Replicate 11.2147374231278
Replicate 20.42478193619734
Replicate 30.67455213939814
Condition 3: 24 Hour
Replicate 11.5208463189654
Replicate 20.14344184541992
Replicate 30.79816596218722


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_152749.p1 GENE.S_Transcript_152749~~S_Transcript_152749.p1 ORF type:5prime_partial len:158 (+),score=23.60,zf-RVT|PF13966.2|2.7e-10,zf-RVT|PF13966.2|9.5e+02 S_Transcript_152749:2-475(+)
CGTGCATTTTTGTGGACGGTTGCCTTGGACCGAGTTAATACCCATGATGTTTTGCAACGACGTTATGCACATTGGTGTCTTTCTCCTGGAGTTTGTGTTATGTGTCGAAGAGAGAATGAAACCAATCCCCATCTCTTTCTGACTTGTGAGGTGGCACAAGGCTTATGGCGTAGACTTTTTGTGGTGAGGGGTGAGAATTGGGTTTGCCCACCAATTGTCTCTCATCTTTTGTTGGGTCATTATACGGGTTTTGGGAGAGGAAAAGATCAGAGCTTGTTGTGGCGTAGTGCCATGGCGACAATGCTTTGGAGCATTTGGTTGGAGAGGAATGCAAGGCTTTTCCAGGGTTTGATAACCCCCCCTGATCTTGTTTGGGATAGGGTGGTGTATAGGGCCTCTTTATGGGCACGGGCTTTTGGAGCTTTCAATGATACCCCCTTGTCTGCGGTTGTGCGACATTGGGATATTTTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_152749.p1 GENE.S_Transcript_152749~~S_Transcript_152749.p1 ORF type:5prime_partial len:158 (+),score=23.60,zf-RVT|PF13966.2|2.7e-10,zf-RVT|PF13966.2|9.5e+02 S_Transcript_152749:2-475(+)
RAFLWTVALDRVNTHDVLQRRYAHWCLSPGVCVMCRRENETNPHLFLTCEVAQGLWRRLFVVRGENWVCPPIVSHLLLGHYTGFGRGKDQSLLWRSAMATMLWSIWLERNARLFQGLITPPDLVWDRVVYRASLWARAFGAFNDTPLSAVVRHWDIL*

Click here to download the sequence:
Link to NCBI Protein BLAST