Transcript Information: S_Transcript_152751.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value7E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5477913503157
Replicate 23.2116718976129
Replicate 33.5017853323292
Condition 2: 8 Hour
Replicate 15.6687746412632
Replicate 25.9469471067628
Replicate 36.2058796824629
Condition 3: 24 Hour
Replicate 16.63642030094
Replicate 25.307348280537
Replicate 35.746794927748


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_152751.p1 GENE.S_Transcript_152751~~S_Transcript_152751.p1 ORF type:5prime_partial len:158 (+),score=19.69,zf-RVT|PF13966.2|1.1e-10,zf-RVT|PF13966.2|1.7e+03 S_Transcript_152751:2-475(+)
CGTGCATTTTTGTGGACGGTTGCCTTGGACCGAGTTAATACCCATGATGTTTTGCAACGACGTTATGCACATTGGTGTCTCTCTCCTGGAGTCTGTGTTATGTGTCAAAGCGAGAATGAGACCAATTCTCATCTCTTTTTGACTTGTGAGGTGGCACAAGGTTTATGGCGGAGGCTTTTTGGGTTAAGAGGTGAGGTTTGGATCTGCCCACCAACTGTCTCTCATCTCTTGCTGGGTCGATATGCGGGTTTTGGGAGAGGCAAAGACCAGAACTTATTATGGCATAGTGCTATGGTGACAATGCTTTGGAGCATTTGGTTGGAGAGGAATGCAAGGCTTTTCCAGGGTTTGATAACCCCCCCTGATCTTGTTTGGGATAGGGTGGTGTATAGGGCCTCTTTATGGGCACGGGCTTTTGGAGCTTTCAATGATACCCCCTTGTCTGCGGTTGTGCGACATTGGGATATTTTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_152751.p1 GENE.S_Transcript_152751~~S_Transcript_152751.p1 ORF type:5prime_partial len:158 (+),score=19.69,zf-RVT|PF13966.2|1.1e-10,zf-RVT|PF13966.2|1.7e+03 S_Transcript_152751:2-475(+)
RAFLWTVALDRVNTHDVLQRRYAHWCLSPGVCVMCQSENETNSHLFLTCEVAQGLWRRLFGLRGEVWICPPTVSHLLLGRYAGFGRGKDQNLLWHSAMVTMLWSIWLERNARLFQGLITPPDLVWDRVVYRASLWARAFGAFNDTPLSAVVRHWDIL*

Click here to download the sequence:
Link to NCBI Protein BLAST