Transcript Information: S_Transcript_152757.p2


Annotated TAIR IDAT5G08490.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:2745208-2747757 | Reverse length=849
E-Value2E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.25359528227028
Replicate 30.52996368056323
Condition 2: 8 Hour
Replicate 10.73535828679769
Replicate 20.5142953710282
Replicate 31.470058455516
Condition 3: 24 Hour
Replicate 10
Replicate 20.13025179066866
Replicate 31.1596342255226


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_152757.p2 GENE.S_Transcript_152757~~S_Transcript_152757.p2 ORF type:complete len:174 (+),score=37.05,PPR_2|PF13041.2|48,PPR_2|PF13041.2|0.066,PPR_2|PF13041.2|0.003,PPR|PF01535.16|46,PPR|PF01535.16|0.0014,PPR|PF01535.16|1e+02,PPR|PF01535.16|1.3e+04 S_Transcript_152757:397-918(+)
ATGCAAGTACCAGACTTCAAAACATGGAGTGAACTTATAAGGGCACAATCTATTGATCACAAATATGATGAGGTTCTTTCACTTTTCCTCTCAAAGGTAAAATGGCCATTTGGGTTTAAACCTGATCACCTTATTCTGCAAGCTGCTCTGAAATCATGTGCTATTATCCCAGCCTTTAGTTTGGGTAGGACACTTCATGGGTTGGTCCTTAAACTGGGTCATCTTTCTTGTCTTTCTGTCTCTAAGGGGTTGCTTAATGTGTATGCTAAAGCTAAAAACTTTAATGACTGCAAGAAACTGTTTGATGAGATGCCAAAACATGATGCTGTTGTTTGGAACATTGTGTTGGCTGGGTTATCTGGGTCCAATATGTATGATGCGCAAGTGATGAGGTTGGTTAGTGACATGCATTCTTGTAATGAACCTAAACCCAGCCCTGTTACTGCTTCTGTTGTTCTTCCTGTTTGTGCTCGTTCGAGGAATTTGTATGCAGGGAAGAGCATACACTGTTATGCAGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_152757.p2 GENE.S_Transcript_152757~~S_Transcript_152757.p2 ORF type:complete len:174 (+),score=37.05,PPR_2|PF13041.2|48,PPR_2|PF13041.2|0.066,PPR_2|PF13041.2|0.003,PPR|PF01535.16|46,PPR|PF01535.16|0.0014,PPR|PF01535.16|1e+02,PPR|PF01535.16|1.3e+04 S_Transcript_152757:397-918(+)
MQVPDFKTWSELIRAQSIDHKYDEVLSLFLSKVKWPFGFKPDHLILQAALKSCAIIPAFSLGRTLHGLVLKLGHLSCLSVSKGLLNVYAKAKNFNDCKKLFDEMPKHDAVVWNIVLAGLSGSNMYDAQVMRLVSDMHSCNEPKPSPVTASVVLPVCARSRNLYAGKSIHCYAV*

Click here to download the sequence:
Link to NCBI Protein BLAST