Transcript Information: S_Transcript_15297.p1


Annotated TAIR IDAT1G11950.1
Annotated Gene NameTranscription factor jumonji (jmjC) domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4034747-4038310 | Reverse length=875
E-Value1.1E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.3764296901859
Replicate 27.6340449374734
Replicate 37.2501335690966
Condition 2: 8 Hour
Replicate 110.276365623836
Replicate 211.408832232035
Replicate 39.789071318592
Condition 3: 24 Hour
Replicate 19.0822477556003
Replicate 27.5751326736161
Replicate 37.2878914540145


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_15297.p1 GENE.S_Transcript_15297~~S_Transcript_15297.p1 ORF type:complete len:1104 (+),score=292.23,JmjC|PF02373.18|2.2e-12,zf-4CXXC_R1|PF10497.5|2.1e-06,zf-4CXXC_R1|PF10497.5|5.2e+02,zf-4CXXC_R1|PF10497.5|6.2e+02 S_Transcript_15297:134-3445(+)
ATGGAAGGTGAAACCAACCTAAAATTGAAACCCACTGATTTACACAAGCAAGAAAAAGAAGGGGTTGATAATAATCAAACTTCTTCGTTGACTTCAAAGAAAAGGGGTCGTAAACCGTCAAGAAAATCACCAGAAAAACCAACCCATCAAGAAGAAGAATCTGTAGACTTGGTGGTGATGATGATGAAGAAGAAGAAACCGGGCAGAGGTCGTCCAAGAAAGGACGAGCTCAATGGGCAAGAAGAAAGTAAACAGCAAAACAACAAGCAACAAGAAAATGGCGGAGTGACCCAGAATAAATTACTCCCAAAGAGAAGAACTTGCAGGGTGAAGATTGAAGATAAGGAGGGGATAGAAATGGGTTCTGATGGGATTTTGATAAATGTTAGTAGTAATGAGGGAATACAAGGAAAAGTTGAGTGCCCGGAAGGTGTTTGTGAAAATGCCTCTGAGAAAATGAATGCTCAGAACAAGGGTAGAGTGACAAGGGGAATGAGGGTGAAGGCGTCATTATCAAGGGTTTGTAAGAATGACAAGGAGATTGAGATTGAGGGTAACAACTGTCATCAGTGTAAGAGGAATGACAAGGGTAAAACTGTTCCTTGTACCAAGTGTAAGAGGAAAAGATTTTGCCTCATGTGTATTAAGAGATGGTACCCTCATATGAAAGAAGAGGACTTTGCTGAGGCTTGTTCTGTTTGTCGTGGGAATTGTAATTGCAAGGCTTGTTTGCGTTTGGAAGGGTTGATTAAGATGATATCAAAAGAAGAGTTGAAGATTAATGAAGATGTTAGGGTGAAACACTCTTTGTATTTGTTGGAAATTGTTTTGCCATACTTGAAACAGTTTCAAGAGCAGCAGATGAGGGAAAAAGAGTTGGAAGCTCAAATCCAAGGCGTGGCGTTGGAAGAGGTAAAACTAGAACTAACTGAATGCCATCTTGATGAACGTATGTTTTGTAATATCTGTCAGACTTCTATTGCTGATTTTCATAGAAGTTGCCCTGAATGTTCATATGATTTATGTCTTGTTTGTTGTCGGGAAATTCGTGAGGGGAACCTTAAAGGAGCTGGGGAGGAGGTGGTTATTGAGTTTGTTAACAGAGGGTATGATTACTTGCATGGGGAAGAGTCGGGAGACCCAGAACCTGTGAAGAAAGATGATGTTCAGGGTGATGCTAGCACCTGTAGAGGCTCTGAAAGTCATAAATTGCTGTTAGCGGAATGGAAACCAAATCAAGATGGTAGCATCCCTTGCCCACCAAAAGACCTTGGTGGGTGTGGAAATGGGGTGCTGCAACTCAGGCATAGCTTTCCAGTTGATGTTTTGGAACTCATAAATAAAGCAAAGGAAGTTCTAGGAACATGCAAAGCTGATGATATGTCTGCAACTTGCACACAAGCCTGCAACTGTGTCAGTTCTTTAGATGATGGGGACAATGGTAATTCCAGGAAGGCGGCCTCTCGAGAAGATTCTGATGACAATTATTTGTACTGTCCAGCTGCTGTTGACATTGAGCGGCAAGATCTGCAGCATTTTCAATGGCACTGGTCCAGGGCAGAACCAATCATAGTTAGAGATGCGCTTCAAACAGCCACTGGTCTGAGCTGGGAGCCAATGGTGATGTGGCGTGCTTGTCGTCAGTTGAAACATCCAAATCATTCCAGGCATTTGGATGTTAGGGCTATCAGTTGCCTGGATTGGTGTGAGGTGGACATTAATATTCACAAATTCTCTACAGAATATATGGGGGGCCGATTTGATAACTACATGTGGCCTCATCTATTGAAATTGAAGGACTGGCCACCTTCTACTGAATTTGAAAGGCATTTACCTAGGCATGGTGCTGAGTTTATCAAGGCCCTGCCATTTAAGGAGTACACACATCCACGCGGTGGGATTCTCAATCTTACATCCCAGTTGCCGGAACAGTATCTGAAACCGGATATGGGGCCAAAAACTTACATTGCTTATGGAGTTGCTCAAGAGCTTGGACGAGGGGATTCTGTTACTAAGCTACATTGTGATATGTCTGATGCGGTGAACATTTTGATGCACACAGCGGAAATGAAGCTTAAATCTGCACATCTTCAACAGATCAAGCTGTTGAAGCGCAAGCACATGGCACAAGACCAAAAAGAACTGTATGGAAACACTACAATTGGGAATGACAATGGGCATGTGGCGGATTTGGCTAGCAGTCAGTTGCATTCTGATGTTGTTGATGGTGAAATGGGTGTTCTAAGTTGCAAGGGCATTGCTCATTCTACTAAGGAAGAGCTTCAAGTTGGAGAATCGACGATAACTGAGCAAGGGCATGTACAGGATTTCAAAGATAGTAAGGTATCTCTTCCAAAACATGAAAACCCAGAAGCAGATGAGAATGTGGAAATTGATAAGGAACTTGATGGTAGTTTGAGTGTCCAGAAAGAAAATGTTGTTGCTAATAAAATCAATGATGGGCTTGAAAAACGTGCATTCAGTAGTGGAAATCATCAGGAAAGCAGTTTCTATCACATAGATGTGGAGGTCAAAGAAAATCCATCTGCTTATGATGGAGAAGTTCAAAGGAGCAAAGAGCATGGCTCTCTGTTGGTGTCAGAAGAAGCAGATGGTGGTGTCACTGAAGAGAATAAGCCTCCTCAGGTGAAAAGAAGAGGTAGAAAAAGGAAGAAGGGAGTTGTCGGGGGAAGATCCAGGATGAAGTCCCAGAAAGTATTGAATGGGACTGATGCATCCGAAGCCGAGCCTGAAACCGAAACTTGTGGAAGTGAAAAGGAGGGTGATGTGGATTTGGACAATGAAATGGAAGCTTCAGACTTCGTCGATGGCGGTGCTCTCTGGGATATTTTTCGTAGACAAGATGTCCCTCAGCTCCAAGAGTATCTTAAGAAGCATTTCAAGGAATTCAGGCACATTTATGGGTCTCCTGTGCATCAGGTTGTGCATCCAATTCATGATCAATACTTTTACTTGACTGAAGAACATAAAAGGAAGCTTAGGGCTGAATATGGGGTTGAGCCATGGACATTTGTTCAAAAGCTTGGAGGAGCTGTATTCATTCCTGCAGGTTGTCCACATCAAGTACGAAACTTGAAATCATGCATTAAGGTTGCTATGGATTTTGTCTCACCTGAAAATGTTTCAGAGTGCATGCGTTTAACTGAGGAGTTCCGTGTGCTACCCCAAAATCATAGGGCCAAAGAGGATAAATTGGAAGTAAAGAAGATGACTCTTCATGCTGTTAAGAAGACTCTTGAGGACTTGCAGTCCATCACTTCTAGTTCATTTGCTGCAGAAGATAGAGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_15297.p1 GENE.S_Transcript_15297~~S_Transcript_15297.p1 ORF type:complete len:1104 (+),score=292.23,JmjC|PF02373.18|2.2e-12,zf-4CXXC_R1|PF10497.5|2.1e-06,zf-4CXXC_R1|PF10497.5|5.2e+02,zf-4CXXC_R1|PF10497.5|6.2e+02 S_Transcript_15297:134-3445(+)
MEGETNLKLKPTDLHKQEKEGVDNNQTSSLTSKKRGRKPSRKSPEKPTHQEEESVDLVVMMMKKKKPGRGRPRKDELNGQEESKQQNNKQQENGGVTQNKLLPKRRTCRVKIEDKEGIEMGSDGILINVSSNEGIQGKVECPEGVCENASEKMNAQNKGRVTRGMRVKASLSRVCKNDKEIEIEGNNCHQCKRNDKGKTVPCTKCKRKRFCLMCIKRWYPHMKEEDFAEACSVCRGNCNCKACLRLEGLIKMISKEELKINEDVRVKHSLYLLEIVLPYLKQFQEQQMREKELEAQIQGVALEEVKLELTECHLDERMFCNICQTSIADFHRSCPECSYDLCLVCCREIREGNLKGAGEEVVIEFVNRGYDYLHGEESGDPEPVKKDDVQGDASTCRGSESHKLLLAEWKPNQDGSIPCPPKDLGGCGNGVLQLRHSFPVDVLELINKAKEVLGTCKADDMSATCTQACNCVSSLDDGDNGNSRKAASREDSDDNYLYCPAAVDIERQDLQHFQWHWSRAEPIIVRDALQTATGLSWEPMVMWRACRQLKHPNHSRHLDVRAISCLDWCEVDINIHKFSTEYMGGRFDNYMWPHLLKLKDWPPSTEFERHLPRHGAEFIKALPFKEYTHPRGGILNLTSQLPEQYLKPDMGPKTYIAYGVAQELGRGDSVTKLHCDMSDAVNILMHTAEMKLKSAHLQQIKLLKRKHMAQDQKELYGNTTIGNDNGHVADLASSQLHSDVVDGEMGVLSCKGIAHSTKEELQVGESTITEQGHVQDFKDSKVSLPKHENPEADENVEIDKELDGSLSVQKENVVANKINDGLEKRAFSSGNHQESSFYHIDVEVKENPSAYDGEVQRSKEHGSLLVSEEADGGVTEENKPPQVKRRGRKRKKGVVGGRSRMKSQKVLNGTDASEAEPETETCGSEKEGDVDLDNEMEASDFVDGGALWDIFRRQDVPQLQEYLKKHFKEFRHIYGSPVHQVVHPIHDQYFYLTEEHKRKLRAEYGVEPWTFVQKLGGAVFIPAGCPHQVRNLKSCIKVAMDFVSPENVSECMRLTEEFRVLPQNHRAKEDKLEVKKMTLHAVKKTLEDLQSITSSSFAAEDRA*

Click here to download the sequence:
Link to NCBI Protein BLAST