Transcript Information: S_Transcript_152992.p1


Annotated TAIR IDAT1G55310.3
Annotated Gene NameSC35-like splicing factor 33
Annotated Gene Symbol(s)SR33, SCL33, At-SCL33
Annotation TypeHomolog
Chromosome Positionchr1:20630676-20632695 | Forward length=300
E-Value2E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.433506166065
Replicate 211.783535331854
Replicate 310.374039047025
Condition 2: 8 Hour
Replicate 16.179516512351
Replicate 29.2792326744321
Replicate 38.3567811633165
Condition 3: 24 Hour
Replicate 110.674204432904
Replicate 212.877165668379
Replicate 39.4582666519185


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_152992.p1 GENE.S_Transcript_152992~~S_Transcript_152992.p1 ORF type:5prime_partial len:176 (-),score=28.74,RRM_1|PF00076.18|1.5e-08,RRM_5|PF13893.2|1e-05 S_Transcript_152992:288-815(-)
TTTGTTCAAGATGTTCTTAGTGTTGATGAAGAATGGAAGAAAAAGAGTATGAATACATTTGAGAAGACATTGAAGTCTTCTTTGGTTTCTCCAAGAGAACCTCGTGGTTTTGGATTTGTGCAATTTGTGGACCCTGCTGATGCTGCTGATGCCAAGTATGAAATGGATGGTTATGTTCTCCGTGGTCGGGAATTGACTGTAGTGTTTGCAGAGGAGAACAGGAAAAAACCATCAGAAATGAGGGCAAGAGACCGAGTAAGGGGGCGGTCTTATGATCGCAGGCGTTCCCCTCTCCGTTATTCACGATCTCCACGATATGCAAGGACTTACTCACGTAGCCCTAGTTATTCACCTAGACGTGGTTATTCGAGGTCATTTTCACCTAGGGATAGGTCGTATAGAGGACGCTCTTACTCAAGATCTTCATACTACTCACCATATGGTTCAAGGAGTCGAAGCAGAAGTCCATATGGCAGCCGAAGCCCTAGCGGCAGCTGGCGGAGTATCACCCCTGGCTACTCTAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_152992.p1 GENE.S_Transcript_152992~~S_Transcript_152992.p1 ORF type:5prime_partial len:176 (-),score=28.74,RRM_1|PF00076.18|1.5e-08,RRM_5|PF13893.2|1e-05 S_Transcript_152992:288-815(-)
FVQDVLSVDEEWKKKSMNTFEKTLKSSLVSPREPRGFGFVQFVDPADAADAKYEMDGYVLRGRELTVVFAEENRKKPSEMRARDRVRGRSYDRRRSPLRYSRSPRYARTYSRSPSYSPRRGYSRSFSPRDRSYRGRSYSRSSYYSPYGSRSRSRSPYGSRSPSGSWRSITPGYSR*

Click here to download the sequence:
Link to NCBI Protein BLAST