Transcript Information: S_Transcript_153124.p1


Annotated TAIR IDAT1G12775.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4353906-4355840 | Forward length=644
E-Value3E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.68590209369022
Replicate 20.45490287747453
Replicate 31.1407877989856
Condition 2: 8 Hour
Replicate 11.4290210006326
Replicate 20.92255045937017
Replicate 31.3185060374215
Condition 3: 24 Hour
Replicate 11.013422429976
Replicate 20.5841188550605
Replicate 30.78006322902421


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_153124.p1 GENE.S_Transcript_153124~~S_Transcript_153124.p1 ORF type:internal len:194 (+),score=22.96,PPR_2|PF13041.2|4.7e-15,PPR_2|PF13041.2|7.5e-16,PPR_2|PF13041.2|1.9e-15,PPR_2|PF13041.2|7.5e-23,PPR_2|PF13041.2|3.1e-21,PPR_1|PF12854.3|1.6e-07,PPR_1|PF12854.3|2.2e-10,PPR_1|PF12854.3|4e-06,PPR_1|PF12854.3|8.4e-15,PPR_1|PF12854.3|1.1e-15,PPR_1|PF12854.3|9.1e-09,PPR|PF01535.16|2.3e-07,PPR|PF01535.16|3.8e-08,PPR|PF01535.16|2.5e-05,PPR|PF01535.16|1.2e-10,PPR|PF01535.16|8.7e-09,PPR|PF01535.16|0.006,PPR_3|PF13812.2|2.4e-06,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|3.2e-06,PPR_3|PF13812.2|3.5e-06,PPR_3|PF13812.2|2.1 S_Transcript_153124:1-579(+)
AATCTTGTCACCTACACCTCCTTACTTCGGGGTCTTTGTAGTTTAGGCCGATGGGATGACGCTAAGGAAGCATTGACCGAGATGTTGGAGAGCAATGTAGCGCCAAACATCCATACTTATAGCATGTTAATTGACATGTATTGTAAAGAGGGGATGGTTGAGGAAGCAAGATCCATACTTGAGTTGATGATTAAGAGCGATGAGACGCCAAACATTGTTACTTACTGTTCCCTTTTGGATGGATACTGTTTGCGTGGCCAAATGATTCAAGCATCAGAATTAATGGATTTGCTGGAAAAACATGGGTGCCATCCTAATGTTGTGACCTTGAACACCATGATCAATGGGTATTGCAAGAGTAGAGACCTTGATAAAGCTTTCATACTGTTCAAAGAAATGCCTTCTAAAGGATTGAGCCCCAATGTACATACATATAACACTCTCATAGACGGCTTGTGCAAGGTTAATAGACTTGAATGTGCACTTCAACTCTTCAAAGAGATGCAAGCTGCTCAAGGGATAACTCCAGATGTTGTCACCTATACTTCGTTGTTGGATGGCCTGTGTAAAAATGGACAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_153124.p1 GENE.S_Transcript_153124~~S_Transcript_153124.p1 ORF type:internal len:194 (+),score=22.96,PPR_2|PF13041.2|4.7e-15,PPR_2|PF13041.2|7.5e-16,PPR_2|PF13041.2|1.9e-15,PPR_2|PF13041.2|7.5e-23,PPR_2|PF13041.2|3.1e-21,PPR_1|PF12854.3|1.6e-07,PPR_1|PF12854.3|2.2e-10,PPR_1|PF12854.3|4e-06,PPR_1|PF12854.3|8.4e-15,PPR_1|PF12854.3|1.1e-15,PPR_1|PF12854.3|9.1e-09,PPR|PF01535.16|2.3e-07,PPR|PF01535.16|3.8e-08,PPR|PF01535.16|2.5e-05,PPR|PF01535.16|1.2e-10,PPR|PF01535.16|8.7e-09,PPR|PF01535.16|0.006,PPR_3|PF13812.2|2.4e-06,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|3.2e-06,PPR_3|PF13812.2|3.5e-06,PPR_3|PF13812.2|2.1 S_Transcript_153124:1-579(+)
NLVTYTSLLRGLCSLGRWDDAKEALTEMLESNVAPNIHTYSMLIDMYCKEGMVEEARSILELMIKSDETPNIVTYCSLLDGYCLRGQMIQASELMDLLEKHGCHPNVVTLNTMINGYCKSRDLDKAFILFKEMPSKGLSPNVHTYNTLIDGLCKVNRLECALQLFKEMQAAQGITPDVVTYTSLLDGLCKNGQ

Click here to download the sequence:
Link to NCBI Protein BLAST