Transcript Information: S_Transcript_153270.p1


Annotated TAIR IDAT4G28450.1
Annotated Gene Namenucleotide binding;protein binding
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14061724-14064582 | Reverse length=452
E-Value7.1E-262
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.558087186109
Replicate 224.449272313184
Replicate 322.595405135537
Condition 2: 8 Hour
Replicate 121.701997651652
Replicate 222.223690701715
Replicate 323.198041653986
Condition 3: 24 Hour
Replicate 118.035290122477
Replicate 216.760213858888
Replicate 317.983930116672


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_153270.p1 GENE.S_Transcript_153270~~S_Transcript_153270.p1 ORF type:complete len:453 (+),score=91.78,Sof1|PF04158.10|7.2e-27,WD40|PF00400.28|0.0054,WD40|PF00400.28|3.7e-06,WD40|PF00400.28|4.6,WD40|PF00400.28|0.0043,WD40|PF00400.28|0.00023 S_Transcript_153270:383-1741(+)
ATGAAGGTCAAAGTAATTTCTCGTGTTACAGAAGATTATACTCGTGAACGAAGCAATGACCTTCAGAAAGTGAGTCGCAATTATGATCCCATTCTTCGTCCTCAAGAGAAGGCTGTCGAGTATGTTCGAGCTGTTAATGCTGCTAAATTGGATAAGATATTTGCGAGGCCTTTTATTGGAGCAATGGATGGACATATTGATGCTATTTCTTGCATGGCCAAAAACCCTAAATACTTGAAAGGATTATTTTCGGGGTCAATGGACGGAGATATCCGTCTTTGGGACATTGCTTCCAGGCGTACAGTTTGTCATTTTCCTGGTCATCAAGGTCCCGTGAAGGGTTTGGCAGCATCAACAGATGGGCACATTCTTGTATCATGTGGACTTGATTGCACTGTCAAGCTATGGAGAGTTCCAGATCCTTTCAGCATGGAATCAGATGATACTTCGGATGAATCTTCAGTGCCTTTGGCAGACTACATCGGGAAAAATGCATACAAAGGAGCTGATCACCAGTGGGGTGGGAATCTTTTTGCTACAGCTGGTGCTCAGTTGGAAATTTGGGATCATAACAGGTCGCAGCCAGTAAACACTTTTGAATGGGGAGTAGACACTGTTGTATCCGTTCGTTTCAACCCTGGGGAACCCAATTTGCTGGCTACATCGGGCAGTGACCGCAGTATTGCAATCTATGATCTTCGCTTGTCTACCCCTGCGAGGAAAATCATCATGCAGACAAAAACAATTTCAATTTCTTGGAATCCGATGGAGCCATTGAATTTCACAGCAGCAAATGAAGATTGCAACTGCTATAGTTATGATGTTAGAAAATTGAATGAAGCTAAGTGTGTTCATCAAGATCACGTCTCTGCAGTGATGGACATTGATTACTCTCCCACAGGTCGGGAATTTGCTACAGGATCTTATGATAGAACAGTAAGGATATTCCCATATAACGGTGGTCACAGCCGGGAAATCTACCATACAAAGAGAATGCAGAGAGTCTTCTGTGTCAAATTCAGTTGTGATGGTTCATATGTTATTTCTGGAAGTGATGACACAAATGTGCGGCTCTGGAAAGCTAAACCATCTGAACAACTAGGAGTTCTTCTTCGTAGGGAGGAAAAAAAACATCAGTATAATGAGGCTGTAAAGAACCGTTACAAGCACCTTCCAGAAGTGAAGCGTATTGTTAGGCACAGGCACTTACCTAAAGCTGTGTACAAGGCTCAAAATCTCAGACGCACAATGACAGAAGCAGAGAGGAAGAGAAAGGAGAAAAGAAAAGCGCATAGTGGCCCATCGAGTGTTCAAGAGGAACCACTTCGCAAGAGAAGAATCATTAAAGAGATTGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_153270.p1 GENE.S_Transcript_153270~~S_Transcript_153270.p1 ORF type:complete len:453 (+),score=91.78,Sof1|PF04158.10|7.2e-27,WD40|PF00400.28|0.0054,WD40|PF00400.28|3.7e-06,WD40|PF00400.28|4.6,WD40|PF00400.28|0.0043,WD40|PF00400.28|0.00023 S_Transcript_153270:383-1741(+)
MKVKVISRVTEDYTRERSNDLQKVSRNYDPILRPQEKAVEYVRAVNAAKLDKIFARPFIGAMDGHIDAISCMAKNPKYLKGLFSGSMDGDIRLWDIASRRTVCHFPGHQGPVKGLAASTDGHILVSCGLDCTVKLWRVPDPFSMESDDTSDESSVPLADYIGKNAYKGADHQWGGNLFATAGAQLEIWDHNRSQPVNTFEWGVDTVVSVRFNPGEPNLLATSGSDRSIAIYDLRLSTPARKIIMQTKTISISWNPMEPLNFTAANEDCNCYSYDVRKLNEAKCVHQDHVSAVMDIDYSPTGREFATGSYDRTVRIFPYNGGHSREIYHTKRMQRVFCVKFSCDGSYVISGSDDTNVRLWKAKPSEQLGVLLRREEKKHQYNEAVKNRYKHLPEVKRIVRHRHLPKAVYKAQNLRRTMTEAERKRKEKRKAHSGPSSVQEEPLRKRRIIKEIE*

Click here to download the sequence:
Link to NCBI Protein BLAST