Transcript Information: S_Transcript_153286.p1


Annotated TAIR IDAT3G24670.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9006205-9008801 | Reverse length=440
E-Value9.7E-136
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6550373902475
Replicate 22.0306547602688
Replicate 31.8809755707155
Condition 2: 8 Hour
Replicate 13.0767976079446
Replicate 25.7320905718703
Replicate 34.9843026738016
Condition 3: 24 Hour
Replicate 15.5427316319418
Replicate 22.7625043961219
Replicate 32.8233631796772


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_153286.p1 GENE.S_Transcript_153286~~S_Transcript_153286.p1 ORF type:complete len:402 (+),score=42.79,Pec_lyase_C|PF00544.15|1.5e-21,Pec_lyase_N|PF04431.9|1.4e-13,Pec_lyase_N|PF04431.9|3e+03,Beta_helix|PF13229.2|1.9e-05 S_Transcript_153286:751-1956(+)
ATGGAAAACCATGTCTTCTTTGTTCTCTTGTACTCTTTAACCTTCGTAGTGGTCTCAGCACAAAACTACACGATGCAGTCGGATTCATACTGGCAAATGCAAGCTCGAGAAGCTGAAAAACGTAGCATGGAGGCATACAATCCCAATCCTTTCAATGTCACTAACTATATAAACTACCATGCTCGAATGACTTTAGAAAATGAAGGATTCAACAGTACAAGGAGGATGTTAGGGAAGAGATATAGAGGGCCCTGCCTTGTCACAAATCCCATAGACAGTTGTTGGAGGTGCCGCACCAATTGGGCTAAGAATCGCAAGCGACTAGCCAAGTGTGCTCTAGGGTTCGGAAAAGGGACCATTGGGGGTATGGCTGGTCGGAAGTACGTGGTTACCGACCCTTCCGATGATGATATGTTGAACCCCAAACCTGGCACCCTGCGTTATGCAGTCATTCAGAAAGAGCCTTTATGGATAACTTTTGCAAGGAGCATGATCATTGTACTAAAACATGAACTCATGATGACTAGCGATAAGACTATTGATGCACGTGGTGCAAATGTCTTTATACATGATGGAGCTGGGATTACGATCCAGTATGTTCAGAATATCATCATTCATGGAGTCAAGTTTAAGGACATTAAAGCTACATCTGGAGGGTTGATTCGTGATTCACTTCATCATTATGGTTTGAGGGGTAATAGTGAGGGGGATGCCATCTCTATTTATGGATCCCAACATATTTGGATCGATCATTGCTCATTTTCCAATGCTGCAGATGGTTTAATTGACATAACCCAGGGCTCTACTGCCATAACCATCTCAAATTGCCATATGATGAAGCATGACAAGGTATTTCTATTTGGCGGAAATGACCATTACATGCCGGATAAGAGAATGCAAGTTACAGTTGCATACAACCATTTTGGGAAAAAGTTGATACAAAGAATGCCAAGATGTAGGTTTGGGTTTGTTCATTTGGTAAACAATGATTATACTCACTGGGAAATGTATGCCATTGGAGGGAGCCAGCGTCCCACCATCATTAGCCAAGGCAATCGGTTCATTGCTCCACCAAACCCTAGAGCCAAAGAGATTACACATAGGGTGACTGAATATGAAGCAGTGCAAGATAGTGGAACATGGACATCAAGACCTTATGTTGAATGGAGCCTTTTTTATTCAGTCAGGAACACCTCTTCATCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_153286.p1 GENE.S_Transcript_153286~~S_Transcript_153286.p1 ORF type:complete len:402 (+),score=42.79,Pec_lyase_C|PF00544.15|1.5e-21,Pec_lyase_N|PF04431.9|1.4e-13,Pec_lyase_N|PF04431.9|3e+03,Beta_helix|PF13229.2|1.9e-05 S_Transcript_153286:751-1956(+)
MENHVFFVLLYSLTFVVVSAQNYTMQSDSYWQMQAREAEKRSMEAYNPNPFNVTNYINYHARMTLENEGFNSTRRMLGKRYRGPCLVTNPIDSCWRCRTNWAKNRKRLAKCALGFGKGTIGGMAGRKYVVTDPSDDDMLNPKPGTLRYAVIQKEPLWITFARSMIIVLKHELMMTSDKTIDARGANVFIHDGAGITIQYVQNIIIHGVKFKDIKATSGGLIRDSLHHYGLRGNSEGDAISIYGSQHIWIDHCSFSNAADGLIDITQGSTAITISNCHMMKHDKVFLFGGNDHYMPDKRMQVTVAYNHFGKKLIQRMPRCRFGFVHLVNNDYTHWEMYAIGGSQRPTIISQGNRFIAPPNPRAKEITHRVTEYEAVQDSGTWTSRPYVEWSLFYSVRNTSSS*

Click here to download the sequence:
Link to NCBI Protein BLAST