Transcript Information: S_Transcript_153377.p1


Annotated TAIR IDAT3G25560.3
Annotated Gene NameNSP-interacting kinase 2
Annotated Gene Symbol(s)NIK2
Annotation TypeOrtholog
Chromosome Positionchr3:9279550-9282560 | Reverse length=647
E-Value5.2E-260
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.6774549946111
Replicate 25.4440649557504
Replicate 34.4310469811248
Condition 2: 8 Hour
Replicate 17.8470050950489
Replicate 27.6509785391273
Replicate 37.3821117246689
Condition 3: 24 Hour
Replicate 13.3571141295069
Replicate 23.7773019293912
Replicate 35.02257161314


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_153377.p1 GENE.S_Transcript_153377~~S_Transcript_153377.p1 ORF type:5prime_partial len:462 (+),score=78.31,Pkinase|PF00069.21|6.7e-44,Pkinase_Tyr|PF07714.13|8.3e-43 S_Transcript_153377:3-1388(+)
TCAATTGCCAATATGACCCAGCTCACACTCATAGATTTGTCCTACAATGATTTGAGTGGTCCTGTTCCCAGATTCCAAGCAAAAACCTTCAGTATTGTAGGAAATCCTCGAATATGTGCCACGGGGAGCGAAAAGGATTGTTTTGGGACATCACAATTGCCACTTTCTTTCAATGTGAATGGTTCAGATAGTTCTCAGCCTCCTCTAAAGCCTAAAGGTCATGCTAAACTTGCCTTGGCCCTTGGTACAAGTCTGGCCTGTGTTTGCTTGCTAGTTGTTGGGTTTGGACTACTTTTATGGTGGAGACACAAGCACAACCAGCAGATATTCTTCGATATGAACGATCGACATCATGAAGAAGTTTGCCTAGGAAATTTGAGGAGGTTCCACTTCCGGGAACTTCAGAGTGCCACAGGCAACTTTAGCAGCAAAAACATACTTGGAAAAGGCGGCTTTGGGATAGTATACAAAGGCACACTACCAGATGGGACTATTGTGGCTGTAAAACGGCTCAAGGATGGGAACGCCATTGGTGGGGAAATTCAATTTCAAACTGAAGTTGAGTTGATCAGCTTAGCAGTGCACAGGAACCTTCTACGCCTCAATGGCTTTTGTATGACAGCAACAGAACGTCTTTTAGTTTACCCTTACATGTCTAATGGAAGTGTTGCTTCTCGTCTTAAAGCAAAGCCAGCTTTAGACTGGGTTACCAGAAAGAGAATTGCATTAGGCGCAGCAAGGGGTCTGTTGTACCTTCATGAGCAATGTGACCCGAAGATAATACATAGGGATGTCAAGGCTGCGAATATTCTGCTTGATGAATACTGTGAGGCCGTAGTCGGAGATTTTGGACTGGCTAAGCTCTTGGACCACCAGGATTCACATGTTACGACAGCTGTTAGGGGCACCGTTGGTCATATAGCTCCAGAATATCTCTCAACAGGACAGTCGTCAGAGAAGACCGATGTCTTTGGATTTGGAATCCTTCTACTTGAGTTGATTACAGGCCAGAGAGCACTAGATTTCGGCAAAGCAGCAAACCAGAAAGGAGCCATGCTAGATTGGGTGAGGAAAATTCACCAAGAAAAGAAGTTGGATACCCTGGTTGACAAGGACTTGAGGAACGACTATGACAGGATTGAGCTTGAGGAAATAGTCCAAGTGGCTCTTTTATGTACACAATTCCAACCAAGCCAAAGACCTAAAATGTCAGAAGTGGTAAGGATGCTCGAGGGAGATGGCCTGGCAGAGAAATGGGAGGCTTCTCAAAGAGCTGAATCGACAAGGAGCAGAGGGAACGAGTTCTCCTCTTCAGAGCGATACTCTGACCTTACTGATGATTCTTCGTTGCTCGTCCAAGCAATGGAGCTTTCTGGACCAAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_153377.p1 GENE.S_Transcript_153377~~S_Transcript_153377.p1 ORF type:5prime_partial len:462 (+),score=78.31,Pkinase|PF00069.21|6.7e-44,Pkinase_Tyr|PF07714.13|8.3e-43 S_Transcript_153377:3-1388(+)
SIANMTQLTLIDLSYNDLSGPVPRFQAKTFSIVGNPRICATGSEKDCFGTSQLPLSFNVNGSDSSQPPLKPKGHAKLALALGTSLACVCLLVVGFGLLLWWRHKHNQQIFFDMNDRHHEEVCLGNLRRFHFRELQSATGNFSSKNILGKGGFGIVYKGTLPDGTIVAVKRLKDGNAIGGEIQFQTEVELISLAVHRNLLRLNGFCMTATERLLVYPYMSNGSVASRLKAKPALDWVTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGKAANQKGAMLDWVRKIHQEKKLDTLVDKDLRNDYDRIELEEIVQVALLCTQFQPSQRPKMSEVVRMLEGDGLAEKWEASQRAESTRSRGNEFSSSERYSDLTDDSSLLVQAMELSGPR*

Click here to download the sequence:
Link to NCBI Protein BLAST