Transcript Information: S_Transcript_153462.p1


Annotated TAIR IDAT4G39090.1
Annotated Gene NamePapain family cysteine protease
Annotated Gene Symbol(s)RD19, RD19A
Annotation TypeOrtholog
Chromosome Positionchr4:18215826-18217326 | Reverse length=368
E-Value9.6E-184
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.053913768163
Replicate 237.671039616821
Replicate 335.757326076981
Condition 2: 8 Hour
Replicate 158.361241054069
Replicate 255.394125222302
Replicate 363.947542814944
Condition 3: 24 Hour
Replicate 136.137014710504
Replicate 233.634060796813
Replicate 327.636920997095


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_153462.p1 GENE.S_Transcript_153462~~S_Transcript_153462.p1 ORF type:complete len:376 (+),score=55.08,Peptidase_C1|PF00112.19|9.1e-74,Inhibitor_I29|PF08246.8|1.4e-11 S_Transcript_153462:160-1287(+)
ATGGCACGTTTCTCTCTCCTCCTACTCTCTTTCCTCCTCATAACCGTCGCCTTTTCCGTCACTGTTAACGGCGAAGAAGCCGAAAATCTCCTAATCCGTGAAGTCGTCGACGCCGTTAACTCGGACGTTGTCATCGAGCTTGACTCCCCAGATCACCATTTCTCTCTCTTCAAGACCCGGTTCGGCAAATCCTACGCCACTCAAGAGGAGCACGATTACCGGTTCAAAGTCTTCAAGGCTAACCTGCGCCGTGCTAAGCTTAACCAAGCACTTGACCCGACTGCCACTCATGGGGTAACCCAGTTCTCCGATTTGACCCCGACCGAGTTCCGTAAACGGTTCTTGGGAACCCGGTTGAAGTACCCGGCCCATGCTAATAAGGCCCCCCTTTTGCCTACTGATGATTTGCCTGAGGAGTTTGATTGGAGAGATAAAGGTGCTGTTACTCCTGTCAAGAATCAGGGCTCATGTGGATCTTGCTGGACCTTTAGTACCACGGGAGGTTTGGAAGGTGCACACTTTCTTGCTACCGGAAAACTTGTGAGCTTGAGTGAGCAACAGCTAGTAGATTGTGATCATGAGTGTGACCCAGATGGGGATCCAGACGATTGTGATGCAGGTTGTGATGGTGGATTGATGAACAATGCCTTTGAGTACCTTTGGAAATCTGGGGGACTGATGCGAGAGGAAGATTACCCATATACCGCCAGGGATGGCACCTGCAAATTTGACAAGAGCAAAATAGCAGCTAAGGTGGCAAACTTCAGTGTTATTCCTGATGATGAAGACCAAATTGCTGCAAACCTCTTGAAATATGGCCCTCTTACTGTGGGGATAAATGCGGCTTATATGATGACTTACATGGGGGGAGTTTCTTGCCCGAGAATATGCCCAAAGGATTTGGATCATGGAGTTTTGTTGGTTGGCTATGGCTCTCATGGTTACGCCCCTATTCGAATGAAACAAATGCCATATTGGATCATCAAGAACTCGTGGGGTGAACACTGGGGAGAAAATGGGTACTATAAGGTCTGCAGGGGCTACAATGCTTGTGGTGTTGATTCTCTGGTTTCCGCTGTTTCTGCTGTTAATTTCACCCCGCACACAAATGCCCTCATAAATTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_153462.p1 GENE.S_Transcript_153462~~S_Transcript_153462.p1 ORF type:complete len:376 (+),score=55.08,Peptidase_C1|PF00112.19|9.1e-74,Inhibitor_I29|PF08246.8|1.4e-11 S_Transcript_153462:160-1287(+)
MARFSLLLLSFLLITVAFSVTVNGEEAENLLIREVVDAVNSDVVIELDSPDHHFSLFKTRFGKSYATQEEHDYRFKVFKANLRRAKLNQALDPTATHGVTQFSDLTPTEFRKRFLGTRLKYPAHANKAPLLPTDDLPEEFDWRDKGAVTPVKNQGSCGSCWTFSTTGGLEGAHFLATGKLVSLSEQQLVDCDHECDPDGDPDDCDAGCDGGLMNNAFEYLWKSGGLMREEDYPYTARDGTCKFDKSKIAAKVANFSVIPDDEDQIAANLLKYGPLTVGINAAYMMTYMGGVSCPRICPKDLDHGVLLVGYGSHGYAPIRMKQMPYWIIKNSWGEHWGENGYYKVCRGYNACGVDSLVSAVSAVNFTPHTNALINS*

Click here to download the sequence:
Link to NCBI Protein BLAST