Transcript Information: S_Transcript_1538.p4


Annotated TAIR IDAT4G19490.1
Annotated Gene NameVPS54
Annotated Gene Symbol(s)ATVPS54, VPS54
Annotation TypeOrtholog
Chromosome Positionchr4:10616017-10622934 | Forward length=1034
E-Value3.8E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.95046432982787
Replicate 24.2024361061933
Replicate 31.5368946736334
Condition 2: 8 Hour
Replicate 12.0309895540127
Replicate 22.6633153142532
Replicate 32.0300807242839
Condition 3: 24 Hour
Replicate 12.3405232311351
Replicate 22.1584582453664
Replicate 31.8015746003654


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_1538.p4 GENE.S_Transcript_1538~~S_Transcript_1538.p4 ORF type:3prime_partial len:84 (+),score=10.92,Vps54|PF07928.8|9.9e-23 S_Transcript_1538:2799-3047(+)
ATGCCTTTTGTATGTTTACAGGTGTCTGGCTTGAAATCCATCACATCTAAGCATTTGGCATTGGCGAGTCAAGTTATCAGTTTTGTATATGCTATTATTCCTGACATCCGAAGGATCCTCTTTCTCAAAGTACCCGACGCTAGAAGAGCATTGTTACAATCAGAGATTGATCAGGTTGCACAGGATTATAAGGTTCACCGAGATGAGATACATACAAAGCTGGTTCAGATTATGAAAGAGAGGTTAATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_1538.p4 GENE.S_Transcript_1538~~S_Transcript_1538.p4 ORF type:3prime_partial len:84 (+),score=10.92,Vps54|PF07928.8|9.9e-23 S_Transcript_1538:2799-3047(+)
MPFVCLQVSGLKSITSKHLALASQVISFVYAIIPDIRRILFLKVPDARRALLQSEIDQVAQDYKVHRDEIHTKLVQIMKERLM

Click here to download the sequence:
Link to NCBI Protein BLAST