Transcript Information: S_Transcript_153869.p1


Annotated TAIR IDAT5G42970.1
Annotated Gene NameProteasome component (PCI) domain protein
Annotated Gene Symbol(s)COP8, FUS4, EMB134, COP14, CSN4, FUS8, ATS4
Annotation TypeOrtholog
Chromosome Positionchr5:17237470-17240649 | Reverse length=397
E-Value6.1E-231
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.116732071966
Replicate 216.571390394521
Replicate 314.989800913763
Condition 2: 8 Hour
Replicate 119.493473527776
Replicate 221.090641448905
Replicate 319.484750564025
Condition 3: 24 Hour
Replicate 115.589740640865
Replicate 212.529992743751
Replicate 314.277677119196


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_153869.p1 GENE.S_Transcript_153869~~S_Transcript_153869.p1 ORF type:5prime_partial len:454 (+),score=90.51,PCI|PF01399.23|1.1e+03,PCI|PF01399.23|1.4e-17 S_Transcript_153869:3-1364(+)
ACAATTAAAAACCTGACACCCTCGTCCCTCCCCCTTTTTTTACCCTCTACTTTTCTTCAATCCCTAAACCTCTCTCAAATTCCCCCTTTCTCTCTAGGGTTTTTCGTATATTCAATCACCCAAAAAAATTCGGAACATCAATCAATCAATCAAAACAGCGAAATCTCCATGGAAAGTGCATTAGCGAGTGCTTCAGCAATCGCCGATCAACGCCAGAAGATTGAACAATATCGCCACATTCTCACTACCGTCATATCCTCCAATGACGTTACTCAAGCGAGGAAATTCATTGATCACATAATATCGGAGGATTGCCCGCTAGTAGTTACAAGACAGTTGTTGCTGAACTTTGCGCAAGAGATAGGGAAGTTGGATGCTGAAGTACAGAAAGAGATTGCTCATTATACTCTTAACCAGATTACCCCTCGTGTTGTTTCTTATGAAGAGCAGGTTCATATGATCAGGGAAAAGCTCGCTGAGCTGTATGAGTCTGAGCAGGAATGGTCAAAAGCAGCTAATATGCTTAGTGGAATTAATTTGGATTCTCCAATGAGAGCACTTGATGATGCCTACAGGCTGTCAAAATATGTTCACATTGCTCGTTTGTATCTTGAGGATGATGATGCAGTAAATGCGGAGGCCTATATTAACAAAGCATCCTTCATGGTCAGCAACAGCCAGAATGAAGTATTGAGTTTGCAGTATAAGGTTTGTTATGCAAGGATCCTAGACTTGAAGAGGAAGTTCTTAGAAGCAGCACTACGCTATTATGACATATCTCAGATTGAGAAGCGGCAAATTGGTGATGAGGAAATTGATGAAGCTGCCCTAGAACAAGCTTTAGCAGCTGCTGTCACTTGCACAATATTGGCTGGTGCTGGACCTCAACGGTCTCGGGTTCTCGCTACTTTGTACAAGGATGAACGTTGCTCAAAGTTGAAGATTTACCCAATTTTGCAGAAGGTTTATTTGGAAAGGATCTTGAGAAAACCTGAAATTGATGCATTTGCTGAAGAATTAAAACCACATCAGAAAGCATTTTTGCCAGACAACTTCACTGTGTTGGATCGAGCTATGATTGAGCACAATCTTCTCAGTGCTAGTAAACTTTACACAAACATAAGTTTTGATGAATTGGGTACATTGCTGGGCATCCCTCCACATAAGGCTGAGATGATTGCGTCGAGGATGATATATGAAGATCGAATGAGGGGCTCAATTGATCAGGTGGAAGCTGTCATACATTTTGAGGATGACACAGAAGAGTTGCAGCAGTGGGATCAACAGATCGTTGGAGTATGTCAGGCCCTCAATGATATCCTTGATGGCATGGCCAGAAAGGGTTTCCAGATTCCTGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_153869.p1 GENE.S_Transcript_153869~~S_Transcript_153869.p1 ORF type:5prime_partial len:454 (+),score=90.51,PCI|PF01399.23|1.1e+03,PCI|PF01399.23|1.4e-17 S_Transcript_153869:3-1364(+)
TIKNLTPSSLPLFLPSTFLQSLNLSQIPPFSLGFFVYSITQKNSEHQSINQNSEISMESALASASAIADQRQKIEQYRHILTTVISSNDVTQARKFIDHIISEDCPLVVTRQLLLNFAQEIGKLDAEVQKEIAHYTLNQITPRVVSYEEQVHMIREKLAELYESEQEWSKAANMLSGINLDSPMRALDDAYRLSKYVHIARLYLEDDDAVNAEAYINKASFMVSNSQNEVLSLQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEAALEQALAAAVTCTILAGAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKAFLPDNFTVLDRAMIEHNLLSASKLYTNISFDELGTLLGIPPHKAEMIASRMIYEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGVCQALNDILDGMARKGFQIPV*

Click here to download the sequence:
Link to NCBI Protein BLAST