Transcript Information: S_Transcript_153870.p1


Annotated TAIR IDAT5G42970.1
Annotated Gene NameProteasome component (PCI) domain protein
Annotated Gene Symbol(s)COP8, FUS4, EMB134, COP14, CSN4, FUS8, ATS4
Annotation TypeOrtholog
Chromosome Positionchr5:17237470-17240649 | Reverse length=397
E-Value1.6E-149
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2872008068832
Replicate 24.0906691884754
Replicate 35.269353166743
Condition 2: 8 Hour
Replicate 14.2780418265373
Replicate 23.943973316426
Replicate 36.7381402763467
Condition 3: 24 Hour
Replicate 13.7182780409522
Replicate 24.8909745347133
Replicate 33.6031492007309


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_153870.p1 GENE.S_Transcript_153870~~S_Transcript_153870.p1 ORF type:5prime_partial len:329 (+),score=56.78 S_Transcript_153870:1-987(+)
TTAAAACCTGACACCCTCATCCCTCCCTTTTTTTGTCCCTCTACTTCTCTTCTTCCATCCATAAACCCCTCTCAAATTCCCCCTTTCTCACTAGGGTTTTTCCTGTATTCAATCTCCCCAAAAAAATCCGAAACATCAATCAATCAAAACAGCGAAATCTCCATGGAAAGTGCATTAGCGAGTGCTTCAGCAATCGCAGATCAACGCCAGAAGATCGAACAATATCGCCATATTCTCACTACCGTCATATCCTCCAATGACGTTACTCAAGCGAGGAAATTCATTGATCACATAATATCGGAGGATTGCCCGCTAGTAGTTACGAGACAATTGTTGCTGAACTTTGCGCAAGAGATAGGGAAGTTGGATGCTGAAGTACAGAAAGAGATTGCTCATTATACTCTTAACCAGATTACCCCTCGTGTTGTTTCTTATGAAGAGCAGGTTCATATGATCAGGGAAAAGCTCGCTGAGCTGTATGAGTCTGAGCAGGAATGGTCAAAAGCAGCTAATATGCTTAGTGGAATTAATTTGGATTCTCCAATGAGAGCACTTGATGATGCCTACAGGCTGTCAAAATATGTTCACATTGCTCGTTTGTATCTTGAGGATGATGATGCAGTAAATGCGGAGGCCTATATTAACAAAGCATCCTTCATGGTCAGCAACAGCCAGAATGAAGTATTGAGTTTGCAGTATAAGGTTTGTTATGCAAGGATCCTAGACTTGAAGAGGAAGTTCTTAGAAGCAGCACTACGCTATTATGACATATCTCAGATTGAGAAGCGGCAAATTGGTGATGAGGAAATTGATGAAGCTGCCCTAGAACAAGCTTTAGCAGCTGCTGTCACTTGCACAATATTGGCTGGTGCTGGACCTCAACGGTCTCGGGTTCTCGCTACTTTGTACAAGGATGAACGTTGCTCAAAGTTGAAGATTTACCCAATTTTGCAGAAGGTTGTCTCTCTTTTTTTCTTTTTAACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_153870.p1 GENE.S_Transcript_153870~~S_Transcript_153870.p1 ORF type:5prime_partial len:329 (+),score=56.78 S_Transcript_153870:1-987(+)
LKPDTLIPPFFCPSTSLLPSINPSQIPPFSLGFFLYSISPKKSETSINQNSEISMESALASASAIADQRQKIEQYRHILTTVISSNDVTQARKFIDHIISEDCPLVVTRQLLLNFAQEIGKLDAEVQKEIAHYTLNQITPRVVSYEEQVHMIREKLAELYESEQEWSKAANMLSGINLDSPMRALDDAYRLSKYVHIARLYLEDDDAVNAEAYINKASFMVSNSQNEVLSLQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEAALEQALAAAVTCTILAGAGPQRSRVLATLYKDERCSKLKIYPILQKVVSLFFFLT*

Click here to download the sequence:
Link to NCBI Protein BLAST