Transcript Information: S_Transcript_153890.p1


Annotated TAIR IDAT5G14230.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 Ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4591883-4595775 | Forward length=751
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0755512362776
Replicate 23.1188236547272
Replicate 32.4381103984865
Condition 2: 8 Hour
Replicate 12.7075430114685
Replicate 22.9575349641523
Replicate 33.5154408353765
Condition 3: 24 Hour
Replicate 11.5154173102114
Replicate 22.551162036081
Replicate 32.013801974754


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_153890.p1 GENE.S_Transcript_153890~~S_Transcript_153890.p1 ORF type:complete len:764 (+),score=111.24,Ank_2|PF12796.3|0.032,Ank_2|PF12796.3|0.014,Ank_2|PF12796.3|2.8e-05,Ank_2|PF12796.3|3.4e-08,Ank_2|PF12796.3|1.4e-05,Ank_2|PF12796.3|1.5e-12,Ank_5|PF13857.2|0.061,Ank_5|PF13857.2|75,Ank_5|PF13857.2|4.2e+03,Ank_5|PF13857.2|1.7e+02,Ank_5|PF13857.2|3.5e+02,Ank_5|PF13857.2|0.025,Ank_5|PF13857.2|2.6e-05,Ank_5|PF13857.2|3.2e-07,Ank_5|PF13857.2|17,Ank_5|PF13857.2|0.0018,Ank_5|PF13857.2|8.4e-05,Ank_5|PF13857.2|8.1e-07,Ank_4|PF13637.2|0.69,Ank_4|PF13637.2|56,Ank_4|PF13637.2|4.7e+03,Ank_4|PF13637.2|0.17,Ank_4|PF13637.2|3.1e-08,Ank_4|PF13637.2|6.8e-07,Ank_4|PF13637.2|0.0067,Ank_4|PF13637.2|8.2e-08,Ank_3|PF13606.2|0.077,Ank_3|PF13606.2|2.3e+02,Ank_3|PF13606.2|11,Ank_3|PF13606.2|6.2e+03,Ank_3|PF13606.2|6.3e+03,Ank_3|PF13606.2|0.00038,Ank_3|PF13606.2|0.015,Ank_3|PF13606.2|45,Ank_3|PF13606.2|1.5e+02,Ank_3|PF13606.2|0.076,Ank_3|PF13606.2|0.038,Ank_3|PF13606.2|1.2e+04,Ank|PF00023.26|4.5,Ank|PF00023.26|9.7e+02,Ank|PF00023.26|4.1e+02,Ank|PF00023.26|1.1e+04,Ank|PF00023.26|1.6e+04,Ank|PF00023.26|0.2,Ank|PF00023.26|0.025,Ank|PF00023.26|0.45,Ank|PF00023.26|9e+02,Ank|PF00023.26|5.4e+03,Ank|PF00023.26|0.046,Ank|PF00023.26|3.1e-05,Ank|PF00023.26|3.2e+03 S_Transcript_153890:184-2475(+)
ATGACGGTGTTTTCTCACTCCGTCACCGGCGTCGGCGGAGGCAAACAGGTCTTTCCGGTAGACTACGAGGCAGAAGTCTCTCAACGCCTCCTCGATTCTCTCTCCTCCTCTGATCTCGACTCCGTCTCCGAGTGCCTCTCCGATCCTTTCGTCGACGTCAACTTCATCGGCGCCGTCAATCTCAAGCTCCGACGAACTGAGGTCCTTCTTCGCGATCACTTTCCGAATGAAAATCGCGTCGTTTACGAGGACTTCAAAACTGACGCCACTCCTCTGTTCTTAGCTGTTCATTTCGGAAACTTGAATCTCGTCCGTCAATTTCTGAAAGCTGGAGCTAGTGTAAACCTGAAACTCTTCAGGGGATTTGTGACCACAGCAGCAGTGAGGGAAGGCCATCTTGAGATACTAAAGGTCTTGATCAAAGCCGGGGCTTCTCAGCCAGCTTGCGAGGAGGCCCTCTTGGAGGCAAGCTATCATGGGCGGGCAACGTTTGTGGAGCATCTTATGGGGTCTGATCTGATTCGGCCCCATGTTGCCCTGCATGCTTTTGTCACAGCATGTGCCAGAGGTTTCACTGATGTGGTTGATACAATGATGAAGTGTGGCGTGGATGCAAATGCAGTCGACCGTGTACTTCTCCAATCATCAAAGCCATCGCTTCATACCAACATTGACTGTAGTGGACTTGTGGCTGCAGTTGTTAGTAGGCAAGTCTCTGTTGTCCGCTTATTGGTACAGGCTGATGCAAGAACGGATGTTGAAGTGAAACTCGGAGCATGGTCATGGGACGTAGATTCTGGGGAAGAGTTCCGAGTTGGAGCAGGACTAGCAGAGCCTTATCCCATCACGTGGTGTGCGGTTGAGTACTTTGAAATCAGTGGTGCAATACTCAGAATGCTCCTAAAGAAACACTCTCAAAACAGCACTCATCTCGGAAGAACTCTTCTTCACCATGCCATTCTTTGTGGTAACGTTGGGGCTGTGAATGTGCTTCTGGACTGCGGAGCTGATCTTGAGTCTCCAGTTAAAACCGCATCCAAGTCTCTGTCCCGCCCTTTGCACATGGCTGCTCGACTTGGATCAATGACAATCCTCCGCTCTCTACTTGAAGCTGGCTGTGATATAAACTCGAGAACAGACACTGGCGACACTGCTCTAATGATCTGCGCAAAGTACAAGCAGCAAGAGTGCCTCAAGATATTGGCAACAGCTGGTGCTGATTTCGGGCTGGTAAATAATAATGGTTGTTCTGTTGGGTCAATTGCTAGTGCAAACAAATGGTCTTCTGGTTTCCAAGCAGCAGTTTTCCAAGTCATTAAGGCAGGAAAAGTTCCTAAGAGCAGTAATTTCGCAGTCTTTTCACCTTTGCTCTTTGCTGCCCAAGCAGGTGATTTAGAGGCTTTGAAAATTGTCTTGGCGCAACCAAGTATAGACCTGAACCAACAGGATGACAATGGTTTCACAGCAGTCTTGGTCACAGCCCTAAAAGGTCATGTAGAATCTTTTCGGCTACTTGTATATGCCAAGGCTAATGTAAAGCTGTGCACTAAAACAGGTGAGACCGTGATCTCCTTATCTGAGCTTAGCCGCAAGAGAGACCTATTTGAGAAAGTACTGCTTGAGTACGCACTTCAAATGGACAACCGCAATGCCGAAGGGTTCTACGCTCTACATTGTGCATGCCGTCAAGGGGACTTAGTAGCTGTCCAGCTGTTGACCAGTAAGGGCTACGATATTAATGTTCCTGATGGGGATGGCTACACACCGCTAATGCTAGCAGCAAGAGAAAGCCATGCTCAGGTATGTAAGCTCTTGATTTCGCAAGGAGCTCGGTGTGATTTTAAAAACACCAGAGGTGAAACTGTGCTATCACTGGCCAGAAAGAAAGGCGGAAAGGAAAATGCTACCGAATGTGTTATCCTGGATGAACTCGCACGTCAGGTGGTGTCGAGTGGTGCTCATGTCCAGAAACATACGAGAGCTGGAAAAGGGTCGCCCCATGCTAAAACAATCCGAATGGTCGTGGGCACTGGAGTCTTACAGTGGGGCACATCCAGCCGGAGAAATGTGATTTGTCGAGAAGCTGAAGCAGGGCCTAGTGCTTGCTTTCGAAAGAACAGGAAGGGTAAGGGTGATGCAGATGAACCTGGGATATTCCATGTGGTGACTACCAAGAACAAGGAGGTGCATTTTGTGTGTGAAGGTGGATGTGAAGCTGCTCAACTGTGGGTTAGAGGGATTAAACTCCTAACCAAGGAGGCTGTTCTCAATTCCAAGCGAACAGGAATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_153890.p1 GENE.S_Transcript_153890~~S_Transcript_153890.p1 ORF type:complete len:764 (+),score=111.24,Ank_2|PF12796.3|0.032,Ank_2|PF12796.3|0.014,Ank_2|PF12796.3|2.8e-05,Ank_2|PF12796.3|3.4e-08,Ank_2|PF12796.3|1.4e-05,Ank_2|PF12796.3|1.5e-12,Ank_5|PF13857.2|0.061,Ank_5|PF13857.2|75,Ank_5|PF13857.2|4.2e+03,Ank_5|PF13857.2|1.7e+02,Ank_5|PF13857.2|3.5e+02,Ank_5|PF13857.2|0.025,Ank_5|PF13857.2|2.6e-05,Ank_5|PF13857.2|3.2e-07,Ank_5|PF13857.2|17,Ank_5|PF13857.2|0.0018,Ank_5|PF13857.2|8.4e-05,Ank_5|PF13857.2|8.1e-07,Ank_4|PF13637.2|0.69,Ank_4|PF13637.2|56,Ank_4|PF13637.2|4.7e+03,Ank_4|PF13637.2|0.17,Ank_4|PF13637.2|3.1e-08,Ank_4|PF13637.2|6.8e-07,Ank_4|PF13637.2|0.0067,Ank_4|PF13637.2|8.2e-08,Ank_3|PF13606.2|0.077,Ank_3|PF13606.2|2.3e+02,Ank_3|PF13606.2|11,Ank_3|PF13606.2|6.2e+03,Ank_3|PF13606.2|6.3e+03,Ank_3|PF13606.2|0.00038,Ank_3|PF13606.2|0.015,Ank_3|PF13606.2|45,Ank_3|PF13606.2|1.5e+02,Ank_3|PF13606.2|0.076,Ank_3|PF13606.2|0.038,Ank_3|PF13606.2|1.2e+04,Ank|PF00023.26|4.5,Ank|PF00023.26|9.7e+02,Ank|PF00023.26|4.1e+02,Ank|PF00023.26|1.1e+04,Ank|PF00023.26|1.6e+04,Ank|PF00023.26|0.2,Ank|PF00023.26|0.025,Ank|PF00023.26|0.45,Ank|PF00023.26|9e+02,Ank|PF00023.26|5.4e+03,Ank|PF00023.26|0.046,Ank|PF00023.26|3.1e-05,Ank|PF00023.26|3.2e+03 S_Transcript_153890:184-2475(+)
MTVFSHSVTGVGGGKQVFPVDYEAEVSQRLLDSLSSSDLDSVSECLSDPFVDVNFIGAVNLKLRRTEVLLRDHFPNENRVVYEDFKTDATPLFLAVHFGNLNLVRQFLKAGASVNLKLFRGFVTTAAVREGHLEILKVLIKAGASQPACEEALLEASYHGRATFVEHLMGSDLIRPHVALHAFVTACARGFTDVVDTMMKCGVDANAVDRVLLQSSKPSLHTNIDCSGLVAAVVSRQVSVVRLLVQADARTDVEVKLGAWSWDVDSGEEFRVGAGLAEPYPITWCAVEYFEISGAILRMLLKKHSQNSTHLGRTLLHHAILCGNVGAVNVLLDCGADLESPVKTASKSLSRPLHMAARLGSMTILRSLLEAGCDINSRTDTGDTALMICAKYKQQECLKILATAGADFGLVNNNGCSVGSIASANKWSSGFQAAVFQVIKAGKVPKSSNFAVFSPLLFAAQAGDLEALKIVLAQPSIDLNQQDDNGFTAVLVTALKGHVESFRLLVYAKANVKLCTKTGETVISLSELSRKRDLFEKVLLEYALQMDNRNAEGFYALHCACRQGDLVAVQLLTSKGYDINVPDGDGYTPLMLAARESHAQVCKLLISQGARCDFKNTRGETVLSLARKKGGKENATECVILDELARQVVSSGAHVQKHTRAGKGSPHAKTIRMVVGTGVLQWGTSSRRNVICREAEAGPSACFRKNRKGKGDADEPGIFHVVTTKNKEVHFVCEGGCEAAQLWVRGIKLLTKEAVLNSKRTGI*

Click here to download the sequence:
Link to NCBI Protein BLAST