Transcript Information: S_Transcript_154087.p1


Annotated TAIR IDAT3G06950.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2192869-2194254 | Forward length=323
E-Value5.3E-130
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.263258619597
Replicate 229.569630817748
Replicate 328.467625821989
Condition 2: 8 Hour
Replicate 126.015206444967
Replicate 226.085018538436
Replicate 325.384432625019
Condition 3: 24 Hour
Replicate 128.915011757259
Replicate 225.485032934399
Replicate 323.442896044589


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_154087.p1 GENE.S_Transcript_154087~~S_Transcript_154087.p1 ORF type:5prime_partial len:241 (-),score=28.93,PseudoU_synth_1|PF01416.16|2e-08,PseudoU_synth_1|PF01416.16|1.2e-17 S_Transcript_154087:277-999(-)
AAAGACTTAAATTTAGTTGGTGCAGGTAGGACGGATACAGGAGTCCATGCCTGGGGTCAGGTTGCGCACTTTGTCACGCCTTTCAACTATGATACATTGGATGGAGTACATGCAGCACTGAATGGCCTTCTTCCTTCTGACATCCGGGTGAGGGAGGTGAGTCCTGCGTTGCCAGAGTTCCATGCCCGTTTTTCTACAAAGGGCAAGATATACCGGTACAGCATATATAATGGCCCCGTCATGGACCCCTTTCAGCGTCGATATGCATATCATAGTGTCTATAAGCTTAATGCATCTGTCATGGCAGAGGGTGCAAAGCATTTTATTGGAACGCATGACTTTTCTGCCTTTGCTAATGCAATTCGTAATGATGGAATACGAGATCCTGTGAAGAACATATCCCGATTTGATATCAATGAAAAGGGACCTCTTGTAGAGCTGGAAGTAGAAGGCTCTGGTTTCTTGTATAGACAAGTCCGAAACATGGTTGCATTGTTACTTCAAATCGGAAGAGAAGCAGTTCCTCCTGATATAGTACCGATGATTATGGAAACAAGAGATCGCAAAGAATTGGCCAAGTATGCCTTGTCTGCCCCTGCTCACGGACTGTGTCTGGTAGAGGTGAAGTATAATGAGGAGCATATGCAGCTTCCCGTGCCATGTCCCGCAACCAGTTTTGGTAGGCGCCATACTATTACCAAATGTAAACTTCCTTTCTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_154087.p1 GENE.S_Transcript_154087~~S_Transcript_154087.p1 ORF type:5prime_partial len:241 (-),score=28.93,PseudoU_synth_1|PF01416.16|2e-08,PseudoU_synth_1|PF01416.16|1.2e-17 S_Transcript_154087:277-999(-)
KDLNLVGAGRTDTGVHAWGQVAHFVTPFNYDTLDGVHAALNGLLPSDIRVREVSPALPEFHARFSTKGKIYRYSIYNGPVMDPFQRRYAYHSVYKLNASVMAEGAKHFIGTHDFSAFANAIRNDGIRDPVKNISRFDINEKGPLVELEVEGSGFLYRQVRNMVALLLQIGREAVPPDIVPMIMETRDRKELAKYALSAPAHGLCLVEVKYNEEHMQLPVPCPATSFGRRHTITKCKLPFY*

Click here to download the sequence:
Link to NCBI Protein BLAST