Transcript Information: S_Transcript_154088.p1


Annotated TAIR IDAT3G06950.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2192869-2194254 | Forward length=323
E-Value5E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.72713118128908
Replicate 21.6878636819957
Replicate 30.80623982879128
Condition 2: 8 Hour
Replicate 11.2818540627785
Replicate 21.3447559291639
Replicate 30.81536029090093
Condition 3: 24 Hour
Replicate 10.59685474018017
Replicate 21.1146136840827
Replicate 30.96477765484051


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_154088.p1 GENE.S_Transcript_154088~~S_Transcript_154088.p1 ORF type:5prime_partial len:183 (-),score=7.20,PseudoU_synth_1|PF01416.16|1.1e-08,PseudoU_synth_1|PF01416.16|0.17 S_Transcript_154088:643-1191(-)
AAAGACTTAAATTTAGTTGGTGCAGGTAGGACGGATACAGGAGTCCATGCCTGGGGTCAGGTTGCGCACTTTGTCACGCCTTTCAACTATGATACATTGGATGGAGTACATGCAGCACTGAATGGCCTTCTTCCTTCTGACATCCGGGTGAGGGAGGTGAGTCCTGCGTTGCCAGAGTTCCATGCCCGTTTTTCTACAAAGGGCAAGATATACCGGTACAGCATATATAATGGCCCCGTCATGGACCCCTTTCAGCGTCGATATGCATATCATAGTGTCTATAAGCTTAATGCATCTGTCATGGCAGAGGGTGCAAAGCATTTTATTGGAACGCATGACTTTTCTGCCTTTGCTAATGCGATTCGTAATGATGGAGTACGAGATCCTGTGAAGACTATATCCCGATTTGATATCAATGAAAAGGTAGTTTCCAGAAGTATAACTTTATATTTTATATCATTCCCCTCCCCCCACTTTGGTTATAGGTCTTATCACACCTGTATTCTAATGATATGCATACCAAGTATTTGCAAGCGGAAAGAATCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_154088.p1 GENE.S_Transcript_154088~~S_Transcript_154088.p1 ORF type:5prime_partial len:183 (-),score=7.20,PseudoU_synth_1|PF01416.16|1.1e-08,PseudoU_synth_1|PF01416.16|0.17 S_Transcript_154088:643-1191(-)
KDLNLVGAGRTDTGVHAWGQVAHFVTPFNYDTLDGVHAALNGLLPSDIRVREVSPALPEFHARFSTKGKIYRYSIYNGPVMDPFQRRYAYHSVYKLNASVMAEGAKHFIGTHDFSAFANAIRNDGVRDPVKTISRFDINEKVVSRSITLYFISFPSPHFGYRSYHTCILMICIPSICKRKES*

Click here to download the sequence:
Link to NCBI Protein BLAST