Transcript Information: S_Transcript_154124.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value0.0007
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.49028421238922
Replicate 30.13661285987852
Condition 2: 8 Hour
Replicate 10.63186341680394
Replicate 20.49715219199393
Replicate 30.15789516744431
Condition 3: 24 Hour
Replicate 10.48544185534654
Replicate 20.16788008575072
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_154124.p1 GENE.S_Transcript_154124~~S_Transcript_154124.p1 ORF type:3prime_partial len:135 (-),score=18.80,zf-RVT|PF13966.2|1.2e-13 S_Transcript_154124:1-402(-)
ATGATATTTTCCCTGGTCCACTGTCAAGTTTATCTTCATTTCAGACGTTCGGTTTTGGATAGGGAGATTGATGATTTGGCGGCTCTACTTGGTCTTTTGGATTCTTCTACCATTGGAGAGGGGGATGATAGACGTGTCTGGAAAGGGGACTCAACGGGGATTTTCTCATGCAGGTCCTTTCTTCGTTGCCTTGGGAATAGCAGGGAGACCACCTTTCCGCTGGCTGAGATGATTTGGAAGGCCAAGGCTCCTCTCAAGGTTCGGGGCTTTACTTGGACTCTGGCCTTAGGGAGACTTAACACAAACGATATGGTGCAAAGGAGGAGGCCGGGGTGGTGTCTTTCCCCTGATGTATGTGTGATGTGCGGTGAATGTGGTGAATTGGCGGCTCATCTATTTTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_154124.p1 GENE.S_Transcript_154124~~S_Transcript_154124.p1 ORF type:3prime_partial len:135 (-),score=18.80,zf-RVT|PF13966.2|1.2e-13 S_Transcript_154124:1-402(-)
MIFSLVHCQVYLHFRRSVLDREIDDLAALLGLLDSSTIGEGDDRRVWKGDSTGIFSCRSFLRCLGNSRETTFPLAEMIWKAKAPLKVRGFTWTLALGRLNTNDMVQRRRPGWCLSPDVCVMCGECGELAAHLFL

Click here to download the sequence:
Link to NCBI Protein BLAST