Transcript Information: S_Transcript_15430.p1


Annotated TAIR IDAT1G05460.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)SDE3
Annotation TypeOrtholog
Chromosome Positionchr1:1601357-1604658 | Reverse length=1002
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.284515975228
Replicate 23.7004045776844
Replicate 33.287787339798
Condition 2: 8 Hour
Replicate 15.1063962046299
Replicate 25.4749671776546
Replicate 35.9585438980169
Condition 3: 24 Hour
Replicate 13.663857041144
Replicate 24.3510693110709
Replicate 33.6715634260612


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_15430.p1 GENE.S_Transcript_15430~~S_Transcript_15430.p1 ORF type:complete len:948 (+),score=173.47,AAA_12|PF13087.2|2.6e-49,AAA_11|PF13086.2|6.8e-17,AAA_11|PF13086.2|1e-13,AAA_30|PF13604.2|1.1e-10,AAA_19|PF13245.2|8.8e-09,AAA_19|PF13245.2|3.3e+03 S_Transcript_15430:246-3089(+)
ATGGAAGGACACAAATCAGATGATGAATATTCTGTTATCGGAGACAAAGGGGAGATTGGATTCATAGATTTTGAAGATGATAAATCTGTATGTAGCTATAACCCATGCGAAGAGGGTGAGGTGATTATTTCTGTGCCTTTCCCGTTTGTTGAAGAAAAACCCCAGTCAATTTCTGTTAACGAGGTTGCAGCCAATTCTATCACCATAAGAAACACAACTAGAGAATCTGTGGAACTCTGGGGGATCCAGATCTATGCTTCAAATCCTGATGATTCATTTACTCTGTCATTGATGGAACCTTCTCAAAAAGGATTTGTAGGGTCCACCTCTTTGGAAGACCGAGTGCTGCAGCCACTTAAAACCTTGAAGATTTGGTTGTCTTGCAAGCCGAAAGATATTGGGCTTCACACTTGCATTGTGCATTTCGATGTTGGGAATGACAGGATTGAACGGATAGTCTTCCTTTTGGCAGAAGATAGTATCTCAAAATCTTTAGTTTCAAAGAAGCAACCTTATCAAAGGGGAAGGAGAAAGAACCAGTTTACCATAGATTCTTATGTTGCTGGTGTTCGACCAGCTAGGGCAACGAACCGCAGTTTCCGGTACAAGCTTCCTATGTATGAGATCCCGAAGGACATCAAAGAAGTAGTAGAGAGTAATCAGCTTCCAGATGTTCTAATTGAAGGTCTATCAAGAAAGAACTACGTTGATTACTTCAAAATGTTGCTAATTATGGAAGAACTGCGCTTGGAGGAAGACATGAGGGCTTATGATATGGAGGAAGTGAGAATGAGAAGCCGGGGTCGTCAGTATCTGACCCTTGAAGTTCTGGGATTGGCTGAGAGAAGACCGTCTCTTGTCCATGGAGATTCTGTCTTTGCCAGACTTGCTATCCAAAATTCTGGGGAGATTCCAGTGTATGAGGGTTGTATTCATCGTGTTGAGGCTGATCAAGTATATCTTAGATTTGATGATGACTTTCACTTGCGTCACAGAGATGAAAATTCTTATGACATACGGTTTATGTACAATCGTGTCAATATGAGAAGGCTGTATCAGGCCGTTGAAGCTGCCGAAGGATTACAGACAGACTTCCTCTTTCCATCTGAGACTTTGGTGAAGAGACAGATTACACCATACCTGATGGTGCCAATTTCATGTAATCTTAATGAGGAGCAACTGAATGCTGTTGAAATGATTCTAGGATGCAAAGGGGGAGTTCCATATATAATTAATGGCCCCCCCGGTACTGGTAAAACCATGACACTTGTAGAAGCGATCCTCCAAGTTTATCGGGTCAGAAAAGACACTCGACTTCTGATTTGTGCATCCTCAAATTGCGCAGCAGATCATATACTGGAGAAAATACTGAATGAAAAAGGCCTACAGGTTCGGGAGAATGAGATTTTCAGGCTGAATGCAAGTAGTCGTCCTTATGAGGATATGAAGCCTGATTATATTAGGTTCTGTTTCTTTGAGCAATCTATTTTTAGGTGTCCTCCACTTAAGGCCCTCTTGCGCTACAGAATAGTTATAACAACATATATGAGTTCTTCCCTTCTTTATGCAGAAGGCATCAGGCGGGGACACTTCTCTCACATAATCCTGGATGAGGCAGGCCAAGCTTCCGAACCAGAGACTATGGTTCCCATTTCTAACCTCTGTCAGAAGAACACTGTGGTTGTTCTTGCTGGAGATCCCTTGCAACTAGGGCCTGTCATCTTCTCTACAAATGCTAAGAAATATGGATTTGGAACATCATACATGGAAAGGCTGTTTGAACATGACCTTTATGGTGAAGGGTATGAAGGTTATGTAACAACATTACGGAGGAACTACCGGTGCCATCCTGAAATTCTCCAGCTGCCTTCAAAATTGTTTTATGAAGGGGAGTTGATAGCATGTCGCGAGGCCATGAAATCTACTCCTTGGGCTGATCTCCTTCCTAACAAGGAGTTCCCCATTCTTTTTATTGGTGTCCAAGGGTTCGATGAGAGGGAAGGAGATAATCCCTCATGGTTTAATCGGCTTGAGGCAAGTGTGGTAGTTAAGTTCATCAAGAAGCTAACAATAAGAGATGTCAGAGAGGAAGACTTGGGGGTGATTACCCCTTACCGGCAGCAAGTAGCTAAAATCAAAAGGGCTCTTGAATGTGATGATATGTTTGATGTCAAGATTGGCAGTGTCGAACAGTTTCAAGGACAAGAAAGGGAAGTAATTATCATATCCACTGTCCGCTCGACTATCAAACATGATGAATTTGACAAAATCTATTATTTGGGATTCCTAAGCAATCCTAAAAGGTTCAATGTTTCCATTACTCGAGCTAAATCGTTGCTTGTCATTATTGGGAATCCACATATTATTTGTAAGGATAAATACTGGGCACAACTGTTATGGCGCTGTGTTGACAATGACTCTTATGAGGGCTGTTCTCTTCCTCAAAGGGAAAGCTATGATTACGATATTCCTGCACAGGAGTGTCATCATGCTGCTGATAAAGAGAATTTTGAGGTCAATGCCACGGCTGATCACAGTGAGGAGTGTTCTTGGGATGAATATAAGCCTGTTACGGGTGAAGATCATGGTAAACTTTCTTCTTGGGTGGAAAATAAACCTGTTAATGATCAATGTTTTTCCTGGGAAGAATCTAAACCTGTCCAGGAGGAAGATCAAGCTTATGATCAAAATTGTTCCTGGGAAGAATCTAAACCTGTCGAGGAGGAAGATCAAGCTAATGAACAGGAAGATTTTAAACCTGTCGAGGGCAAAGATCAAGCTTATGAATGGGAAGGTTTTATACCCGTCAAGGATGAAGATGAGTGGTCTGATGGATGGAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_15430.p1 GENE.S_Transcript_15430~~S_Transcript_15430.p1 ORF type:complete len:948 (+),score=173.47,AAA_12|PF13087.2|2.6e-49,AAA_11|PF13086.2|6.8e-17,AAA_11|PF13086.2|1e-13,AAA_30|PF13604.2|1.1e-10,AAA_19|PF13245.2|8.8e-09,AAA_19|PF13245.2|3.3e+03 S_Transcript_15430:246-3089(+)
MEGHKSDDEYSVIGDKGEIGFIDFEDDKSVCSYNPCEEGEVIISVPFPFVEEKPQSISVNEVAANSITIRNTTRESVELWGIQIYASNPDDSFTLSLMEPSQKGFVGSTSLEDRVLQPLKTLKIWLSCKPKDIGLHTCIVHFDVGNDRIERIVFLLAEDSISKSLVSKKQPYQRGRRKNQFTIDSYVAGVRPARATNRSFRYKLPMYEIPKDIKEVVESNQLPDVLIEGLSRKNYVDYFKMLLIMEELRLEEDMRAYDMEEVRMRSRGRQYLTLEVLGLAERRPSLVHGDSVFARLAIQNSGEIPVYEGCIHRVEADQVYLRFDDDFHLRHRDENSYDIRFMYNRVNMRRLYQAVEAAEGLQTDFLFPSETLVKRQITPYLMVPISCNLNEEQLNAVEMILGCKGGVPYIINGPPGTGKTMTLVEAILQVYRVRKDTRLLICASSNCAADHILEKILNEKGLQVRENEIFRLNASSRPYEDMKPDYIRFCFFEQSIFRCPPLKALLRYRIVITTYMSSSLLYAEGIRRGHFSHIILDEAGQASEPETMVPISNLCQKNTVVVLAGDPLQLGPVIFSTNAKKYGFGTSYMERLFEHDLYGEGYEGYVTTLRRNYRCHPEILQLPSKLFYEGELIACREAMKSTPWADLLPNKEFPILFIGVQGFDEREGDNPSWFNRLEASVVVKFIKKLTIRDVREEDLGVITPYRQQVAKIKRALECDDMFDVKIGSVEQFQGQEREVIIISTVRSTIKHDEFDKIYYLGFLSNPKRFNVSITRAKSLLVIIGNPHIICKDKYWAQLLWRCVDNDSYEGCSLPQRESYDYDIPAQECHHAADKENFEVNATADHSEECSWDEYKPVTGEDHGKLSSWVENKPVNDQCFSWEESKPVQEEDQAYDQNCSWEESKPVEEEDQANEQEDFKPVEGKDQAYEWEGFIPVKDEDEWSDGWK*

Click here to download the sequence:
Link to NCBI Protein BLAST