Transcript Information: S_Transcript_154412.p1


Annotated TAIR IDAT1G79910.1
Annotated Gene NameRegulator of Vps4 activity in the MVB pathway protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:30055050-30057011 | Forward length=381
E-Value5.7E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.10023729278787
Replicate 20.20774754762255
Replicate 30.13892833207985
Condition 2: 8 Hour
Replicate 10.32128648312065
Replicate 20.3791838752496
Replicate 30.16057135672302
Condition 3: 24 Hour
Replicate 10
Replicate 20.042681377733234
Replicate 30.18999656802347


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_154412.p1 GENE.S_Transcript_154412~~S_Transcript_154412.p1 ORF type:5prime_partial len:531 (+),score=83.54,Ist1|PF03398.10|4.5e-41,Ist1|PF03398.10|2.9e+03 S_Transcript_154412:1-1593(+)
TTAATACAATCAATAACAAAAACCCATCATATTAAATATTGGCAAGTACTACTAAGGAAAAAAAAACAACCAAGAAAAAAAAACAAAGAAAGAAAGAAGAAGGGAGAACAAATGTTGGACGGATTATTTGGTCGAAGTAATTTCAAAAACAAATGCAAATCGGCTCTGACTCGAACGAAAACCAGGTTGGAGGTGATTAAAAAGAAACGAAATGCAATGCAAAGGTTCCTCAAGAAAGACATTGTTGATCTATTACAGAATGATCTTGAGCGCAATGCCTATGGCCGGGCCGAAGGGTTATACGTCGAGTTGAACCTATCATCTTGTTACGACTATGTAGAACAATGTTGCTCTTGCATGTCAGAGCATCTCAAAGAAATGCAAAAACAAAGTGAGTGCCCTGAGGAATGCAAAGTTGCTGCTGCTTCATTGATATATGCTGCAGCTAGATTTGCTGATCTTCCGGAGCTACGAAATCTGAGGGATCTATTGAATGAGAAATACGTCAAAGCTCTAGAACCATTTGTCAGCAAGGAGTTTGTAGAGAAGTTAAAAGGACAATGTCCGACGATGGAAATGAAGCTTCAGTTGATGCAAGACATTGCACAGGAATTTTCCTTGACGTGGGATCCCCAACCTCTAGAGCAACAACTGCAAAATCCTTCATTAACCACAAATGACAAGTTTCCCAGAAGCAGGTCTAATATAGTTAAGGAAACACAAGTGCAAAGTGACAAACAGAGTGATGAAGACAACAGTGGAGCTAAAATGCGCTACTCACATTCATGTTTAACATTCAGTGATAACCTAGAGGAGCAACGTACCAAGCGAGATCCTGTAATTCCATTTGCTACCTCAAGGAGCGATTCTGAAGATTATGCCAATACAAAGCCCTTTGTTAATAGAATTGTCCCAGCTCCCTATATCATAGCCAGCAAGGAAGATGAAGATAATGAATTTGGATCTAGATACAAAGAGAAGAAAACTAATCACAAGCTGGACATGGAAAAGAATAATGGTTCTGATGAAGGTTCCGTTGGTAGAGTTAGGCCGAGACCTAGATCAGTCAGAACAAAGTTCTTGAAACAATCTCAGAGTACTGTGGTCAGCAGTTCTGAACATGATCATACCGATGTAAAGGAGACCTTGAGCGCAAGAGTTGCAGGAAACACGGGATATGGTCTTAGAACGTATGAGAAAGATACAGACGAAGACATGGAAGATGTGTTCTCGCCAAATTACATGAAAAAGAAGTCACTAAGAACTCCAACTAGTGCAAGGAGTGAAAACTCAAACGCGCAAATTATGTCTGAATTGCCTTTACCTCCAGGCAGAAGAAGGTACCTGTTTCCTGAATCACAGCCAGCATCTCCACTAAAAGAAGCTGATGTTAATGTTAACATTAAATCAGAAGTATTTTCAGGGAAGAGTAAATTTCTGCCACCTGGTGAACAGCAGGCAGAACAGCCAGTTGAACCAACACATAGGCATTCCAGATCTTCGTCTTTTCAAAATGATCATGTTCATCCTAAGATGCCAGATTTCGATGAATTAGCAGAAAGGATAGCGGCCTTTAGAAATATAGATGGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_154412.p1 GENE.S_Transcript_154412~~S_Transcript_154412.p1 ORF type:5prime_partial len:531 (+),score=83.54,Ist1|PF03398.10|4.5e-41,Ist1|PF03398.10|2.9e+03 S_Transcript_154412:1-1593(+)
LIQSITKTHHIKYWQVLLRKKKQPRKKNKERKKKGEQMLDGLFGRSNFKNKCKSALTRTKTRLEVIKKKRNAMQRFLKKDIVDLLQNDLERNAYGRAEGLYVELNLSSCYDYVEQCCSCMSEHLKEMQKQSECPEECKVAAASLIYAAARFADLPELRNLRDLLNEKYVKALEPFVSKEFVEKLKGQCPTMEMKLQLMQDIAQEFSLTWDPQPLEQQLQNPSLTTNDKFPRSRSNIVKETQVQSDKQSDEDNSGAKMRYSHSCLTFSDNLEEQRTKRDPVIPFATSRSDSEDYANTKPFVNRIVPAPYIIASKEDEDNEFGSRYKEKKTNHKLDMEKNNGSDEGSVGRVRPRPRSVRTKFLKQSQSTVVSSSEHDHTDVKETLSARVAGNTGYGLRTYEKDTDEDMEDVFSPNYMKKKSLRTPTSARSENSNAQIMSELPLPPGRRRYLFPESQPASPLKEADVNVNIKSEVFSGKSKFLPPGEQQAEQPVEPTHRHSRSSSFQNDHVHPKMPDFDELAERIAAFRNIDG*

Click here to download the sequence:
Link to NCBI Protein BLAST