Transcript Information: S_Transcript_154542.p1


Annotated TAIR IDAT5G62960.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25269444-25271533 | Forward length=347
E-Value2.2E-148
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.898242434449
Replicate 22.7966916340512
Replicate 31.8182979237353
Condition 2: 8 Hour
Replicate 13.3039337111051
Replicate 22.5207716777157
Replicate 34.3232141621371
Condition 3: 24 Hour
Replicate 13.0767441536048
Replicate 21.5960430687569
Replicate 32.557728446716


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_154542.p1 GENE.S_Transcript_154542~~S_Transcript_154542.p1 ORF type:complete len:355 (+),score=42.45 S_Transcript_154542:1052-2116(+)
ATGAGTAAAAACTCATGGGAGCCATTGACAAAAGGTGATACAGCCACTCAAAGCTACTGGCTAAACTGGAGGGTTTTGTTATGTGCACTCTGGATATTGACCTCCATGATATTTGCTTCATTTCTTATATCAAAATATGAAGGGCCAAGAAATTCAAGGCCTAACAATAGCAACAACAGTGGGACTCAAAGTGGCACAGAAACAACAGCCCCCACAAAGAAGGACAATCCTGGAATTTTGTATGCTGATGAAGTTTGGAAGCCTTGTCTTAAAGGAATGCACCCTGCTTGGTTATTGGCTTTCAGAGTTTGTGGGTTTTTTGTCTTGTTGATTCTCCTCATTGTCAATGCTATTGTTGATAATCCCACCATTTTCTACTATTACACACAGTGGACATTTACTTTGGTGACCATATATTTTGGGCTAGGATCAGTGCTCTCAATGCATGGATGTTATGAGTATCATAACATAATTAGTGGTGATAGGGTTGATCATCATGAAGATATTGATACAGAAAGAGGTGGTATTTATTTGGACTATCCCACAACTTCAAATACAACTAAAACCACTTTTAGTTTGAGATTCCCTCAACCTGATCTTCCTCGCCCAATTGCTGGATTTTGGGCCTATGTTTTCCAAATTATTTTTCAGATGAATGCAGGAGCTGTTATGCTCACAGACTGTGTGTTTTGGTTCATAATGGTTCCATTCCTTGAGTCAAAAAATTATGATCTCAGCTTTTTCATGATAAACATGCACACAATCAACCTTGTCTTCCTACTTGGTGATACAGCTTTGAATTGCTTGCGATTCCCTTCGTTTCGTATTTCGTATTTCTTCCTGTGGACAGCATTCTATGTGGTTTTTCAGTGGATTCTTCATGCTTGTATTTCCATATGGTGGCCATATCCATTCTTGGACTTGTCTTCTTCATATGCTCCTTTGTGGTATTCCTCAGTGGCAATCATGCACATTCCATGTTATGGCATCTACTTTCTAATAATAAAGCTCAAGCATATGCTCTTGTCAAGATATTTTCCTCAAACATACCAGTGCTCAAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_154542.p1 GENE.S_Transcript_154542~~S_Transcript_154542.p1 ORF type:complete len:355 (+),score=42.45 S_Transcript_154542:1052-2116(+)
MSKNSWEPLTKGDTATQSYWLNWRVLLCALWILTSMIFASFLISKYEGPRNSRPNNSNNSGTQSGTETTAPTKKDNPGILYADEVWKPCLKGMHPAWLLAFRVCGFFVLLILLIVNAIVDNPTIFYYYTQWTFTLVTIYFGLGSVLSMHGCYEYHNIISGDRVDHHEDIDTERGGIYLDYPTTSNTTKTTFSLRFPQPDLPRPIAGFWAYVFQIIFQMNAGAVMLTDCVFWFIMVPFLESKNYDLSFFMINMHTINLVFLLGDTALNCLRFPSFRISYFFLWTAFYVVFQWILHACISIWWPYPFLDLSSSYAPLWYSSVAIMHIPCYGIYFLIIKLKHMLLSRYFPQTYQCSR*

Click here to download the sequence:
Link to NCBI Protein BLAST