Transcript Information: S_Transcript_154679.p1


Annotated TAIR IDAT5G37190.1
Annotated Gene NameCOP1-interacting protein 4
Annotated Gene Symbol(s)CIP4
Annotation TypeHomolog
Chromosome Positionchr5:14723362-14726694 | Reverse length=876
E-Value3E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20393104394774
Replicate 20.38039292340543
Replicate 30.81261097686363
Condition 2: 8 Hour
Replicate 10.40853238155427
Replicate 20.72858510895661
Replicate 30.57168939936732
Condition 3: 24 Hour
Replicate 10.50218122966883
Replicate 20.43417263556221
Replicate 30.33822664911075


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_154679.p1 GENE.S_Transcript_154679~~S_Transcript_154679.p1 ORF type:3prime_partial len:522 (+),score=149.91 S_Transcript_154679:137-1699(+)
ATGGCTAAACGTAAGGCAACCTTTGATAGCAACGATGATGATAACAAAGAAGAAGAAGAACGACAACAACGGCCAGTTTATATAGAGACAAGTCTCAACACCCACCTAGTACTCCAAGTTTACCCTTCTGACACTGTCACCACCCTCAAACAAAAATTCTTGCTTGAGCATGCTGATGCCTATCCAGACATTGGGGAGATTCAAGTCACTGCCTTTAAGGTAAAGCAGAAGGGAAGTTATTTTCGTCTAGCAAACTCTATGCTTGTTAAAACTGCCTTTTATGGGGTGGTGAAGCCTTGGTTTTTATATGCTGATGCTGTTGTTACTCAAAGAGCTTGTGTTAATCAAACCCTTGCAATTATCCCCCATAGAGGACAACCCACTCCTTTTGCTTCTTTCAAGCCTGGGGAGTTGAAGATTGAGGGAAATAATAAGGAGGATCGTTTCGGAACGAACCCGTACAATACTGAGAACATGTTGCAACTCAAGGATTTGAGCGCTAAGGCCGGTCTGAGTAGAAAGAAAAAGAAAAGCAGAGTGCTGAATTTTGATAATGAGGATGAGAATGATGATGTACAAAGCTCAAGTCTTCTAGGGAGCTATATTACTCCAGTTGATGATGATCAAGGCAAAGCCTTTGGGCCGGCAAGTAAATCTATGTCAGGTTCTGAACTACAGAAAGACCCGCATTTAAATTGCAAGGGGAGTGAAGGTCCCGCAACAGAAGGCAATGTGAAGAATGTTGGTGATGGTACTGAGTTGAAGGATAGTGTTGACGACAAATCTTTCCAATCTGGCTCTCCTGCTAAGAAGAAACGCAAAGTTGTGAATGACAATGCTCAAGAGTTGTCTTTGTTGGGAGCCAAATCTCTACTCTCTGATCCTAATAGAGCAGCTTCCAAGCCAGAAACTCTAGTCAACAATTTTGATGGAGAAGACATGCAGAAAAGTAGATTGGTTGATTCGAATGCCATGCCATCTGAAGTCCTCAAAATTTCTAAAGCCTCTAAAAAATGGAAAATGGAAGAAAGGGATGTGAATTGCGAGGTCCCTTCTTCAGAAGCCAGTAAAGAGGAGAACTTGAAAGACACAGAGCGTCATGCTTGTGATGCTTCTGCTATAGCCACTGATACAGCAGCAGAGGTGGAAGTTAAGAGGTTCCAGTCATTGGATATGCCTTTGGGAGTTGTTGGCAACAATCATCAGCCAGAAGGGACTACCGCAAGTTTTGCTGAACATGTTGACACTGAAAACAGTGGACTAGCAAATGGGAATGGGGTTAAGAAAGCAAAGGAATTTGATGGTGGTGAAACTCAAGGAACCCATCATACAACTTCAAGTGAAGTGCCCGATAAGTTGGAGGACAGTTTTGCACCTTTAGAGGGTGAAAATACCATCCGTGACAGTGAACCTGACAACATGACAATTGCTGAAGGAATAAAAGCTACAAATGAAACTGTGGAGCTAGCGAGCACAGCCAAGAAAAAGAAGGCAAAGAAAGGGAAGAACTCTCTTGCAGATAGGCCAGACTTCATGAGCATTGAAAATAACCATCAGAATGCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_154679.p1 GENE.S_Transcript_154679~~S_Transcript_154679.p1 ORF type:3prime_partial len:522 (+),score=149.91 S_Transcript_154679:137-1699(+)
MAKRKATFDSNDDDNKEEEERQQRPVYIETSLNTHLVLQVYPSDTVTTLKQKFLLEHADAYPDIGEIQVTAFKVKQKGSYFRLANSMLVKTAFYGVVKPWFLYADAVVTQRACVNQTLAIIPHRGQPTPFASFKPGELKIEGNNKEDRFGTNPYNTENMLQLKDLSAKAGLSRKKKKSRVLNFDNEDENDDVQSSSLLGSYITPVDDDQGKAFGPASKSMSGSELQKDPHLNCKGSEGPATEGNVKNVGDGTELKDSVDDKSFQSGSPAKKKRKVVNDNAQELSLLGAKSLLSDPNRAASKPETLVNNFDGEDMQKSRLVDSNAMPSEVLKISKASKKWKMEERDVNCEVPSSEASKEENLKDTERHACDASAIATDTAAEVEVKRFQSLDMPLGVVGNNHQPEGTTASFAEHVDTENSGLANGNGVKKAKEFDGGETQGTHHTTSSEVPDKLEDSFAPLEGENTIRDSEPDNMTIAEGIKATNETVELASTAKKKKAKKGKNSLADRPDFMSIENNHQNA

Click here to download the sequence:
Link to NCBI Protein BLAST