Transcript Information: S_Transcript_154697.p1


Annotated TAIR IDAT4G19170.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 4
Annotated Gene Symbol(s)NCED4, CCD4
Annotation TypeHomolog
Chromosome Positionchr4:10481835-10483622 | Forward length=595
E-Value2E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13860938143323
Replicate 20.80437253595106
Replicate 30.48027958551043
Condition 2: 8 Hour
Replicate 10.66641844741041
Replicate 21.5147605849815
Replicate 31.8873406733577
Condition 3: 24 Hour
Replicate 10.34132630454053
Replicate 20.94432548234781
Replicate 30.6568240730499


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_154697.p1 GENE.S_Transcript_154697~~S_Transcript_154697.p1 ORF type:3prime_partial len:192 (+),score=12.23,RPE65|PF03055.11|7.4e-22 S_Transcript_154697:267-839(+)
ATGGATGTTTTTTCGTCTTCTTTCCTCTCATCATCAATAGTACCACATTACAATTTCTCTCTTCTAGTAACAAAACCAGCTTCTTCATCATCATCCCCTCGGCTTACCGTTATTTCATCATCACGGACATCCACCATCATCCCCTCACTTATTATTAACAAACCCAAATCTCTGAAAAAGTTTACTAATTCACTTTCCTTAACTCTTCTAAATGCCTTAGATACCGTGATCAATAAGTTCATCGACCCTCCTAATCGACCATCCGTTGATCCAATAACTGTCCTCTCGGGCAACTTTACTCCGGTGGAGGAGCTCCCCCCAACGGAATGTGAGGTCATCGAGGGCAACCTGCCCTCGTGCCTTGATGGGGCCTACATTCGCAATGGCCCCAATCCGCAGTTCTTCCCTAGTCGGCCCCACCACCTCTTTGATGGTGACGGCATGTTGCATAGCATCCGAATATCAAATGGCAAGGCCACGCTTTGTAGTCGCTTTGTCAAGACATACAAGTACATGGTAGAACATGAAGCGGGAACCAGTCTTCTTCCAAACATCTTTGCTGGGGTCAATAGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_154697.p1 GENE.S_Transcript_154697~~S_Transcript_154697.p1 ORF type:3prime_partial len:192 (+),score=12.23,RPE65|PF03055.11|7.4e-22 S_Transcript_154697:267-839(+)
MDVFSSSFLSSSIVPHYNFSLLVTKPASSSSSPRLTVISSSRTSTIIPSLIINKPKSLKKFTNSLSLTLLNALDTVINKFIDPPNRPSVDPITVLSGNFTPVEELPPTECEVIEGNLPSCLDGAYIRNGPNPQFFPSRPHHLFDGDGMLHSIRISNGKATLCSRFVKTYKYMVEHEAGTSLLPNIFAGVNS

Click here to download the sequence:
Link to NCBI Protein BLAST