Transcript Information: S_Transcript_154698.p1


Annotated TAIR IDAT4G19170.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 4
Annotated Gene Symbol(s)NCED4, CCD4
Annotation TypeHomolog
Chromosome Positionchr4:10481835-10483622 | Forward length=595
E-Value5E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.69304690716616
Replicate 20.11491036227872
Replicate 30.19211183420417
Condition 2: 8 Hour
Replicate 10.77748818864547
Replicate 21.2817204949843
Replicate 30.55510019804639
Condition 3: 24 Hour
Replicate 10.11377543484685
Replicate 20
Replicate 30.52545925843992


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_154698.p1 GENE.S_Transcript_154698~~S_Transcript_154698.p1 ORF type:3prime_partial len:192 (+),score=20.12,RPE65|PF03055.11|5.5e-22 S_Transcript_154698:262-834(+)
ATGGATGGTTTTTCGTCTTCTTTCTTGTCATCATCAATAGTACCACAACACAATTTCTCTCTTTTAGTAACAAAACCATCTTCTTCATCATCACCCCCTCGGCTTACTGTTATTTCATCATCACGGACATCCACCATCATCCCCTCACTTATTATTAACAAACCCAAATCTCTGAAAAAGTTAACTCCTCCACTTTCCTTAACTCTTCTAAACGCCTTAGATACCGTGATCAATAAATTCATTGATCCTCCTAATCGACCATCCGTTGATCCAATCATTGTCCTCTCAGGCAACTTTGCACCGGTGGAGGAGCTCCCCCCAACTGAATGTGAGGTCATCGAGGGCAACCTGCCCTCGTGCCTTGATGGGGCCTACATTCGCAATGGCCCCAATCCGCAGTTCTTCCCTAGTCGGCCCCACCACCTCTTTGATGGTGACGGCATGTTGCATAGCATCCGAATATCAAATGGCAAGGCCACGCTTTGTAGTCGCTTTGTCAAGACATACAAGTACATGGTAGAACATGAAGCGGGAACCAGTCTTCTCCCAAACATCTTTGCTGGGGTCAACAGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_154698.p1 GENE.S_Transcript_154698~~S_Transcript_154698.p1 ORF type:3prime_partial len:192 (+),score=20.12,RPE65|PF03055.11|5.5e-22 S_Transcript_154698:262-834(+)
MDGFSSSFLSSSIVPQHNFSLLVTKPSSSSSPPRLTVISSSRTSTIIPSLIINKPKSLKKLTPPLSLTLLNALDTVINKFIDPPNRPSVDPIIVLSGNFAPVEELPPTECEVIEGNLPSCLDGAYIRNGPNPQFFPSRPHHLFDGDGMLHSIRISNGKATLCSRFVKTYKYMVEHEAGTSLLPNIFAGVNS

Click here to download the sequence:
Link to NCBI Protein BLAST