Transcript Information: S_Transcript_15478.p1


Annotated TAIR IDAT2G40060.1
Annotated Gene NameClathrin light chain protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16726564-16728001 | Forward length=258
E-Value2.5E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 172.062477370586
Replicate 259.383287477856
Replicate 355.807240356869
Condition 2: 8 Hour
Replicate 169.515233371433
Replicate 270.892611273939
Replicate 370.245406880052
Condition 3: 24 Hour
Replicate 147.23601430109
Replicate 258.719875447809
Replicate 356.258261384139


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_15478.p1 GENE.S_Transcript_15478~~S_Transcript_15478.p1 ORF type:5prime_partial len:308 (+),score=78.38,Clathrin_lg_ch|PF01086.13|3.9e-10 S_Transcript_15478:1-924(+)
CAAGTGGTCAGTGCTCACTGCTCGGATCACAATTCACACATCCTCTCACTTTTCTCTCTCCATTTCACAGTTGGGTTCCTCTCCTCAATCCTTAAAGTTCATCACCTTAACAACTCAAATTCTAAATCTCCAGAGAGAATGTCTTCTTTAAATCATGATACCTTCGACGAATCAAGTCACTCTTTTGAAGATGACGTCACAGGGGGAGGCTACGCTCCCCCTCCTCAGTACACTGATTTCTCCGATCCCCACTCAGTCAACAACGACGACGTTTTCGGTGGTTCAAATCAAGAGGACCCGATCTTCGGCGAGGCTGCTAATGGACCCGTTTTCGTGGAATCATCAAATGGGCCCATTTTGCCTCCTCCTTCTGAGATGCAAGAAGAAGGCTCTGCTCTTCGTGAATGGCGCAGGCAAAATGCAATGATACTGGAGCAGAAGGAGAAAAGAGAGAAAGAAATCTTGTGCCAAATAATTGAGGAAGCAAATGAGTACAAAACTGCCTTCCATGAGAAGAGAAAGGTCACATGTCAGAACAATAAAACCAACAATCGTGAAAAGGAGAAGTCGTTTCTGGCCAACCATGAGAAGTTTCATAAGGAGGCTGACAAGAGTTACTGGAAAGCAATTGCAGAACTCATCCCTAATGAGGTCCCCGCTATAGAGAAGAAGAGAGGGAAGAAGGACCAGGAAAAGAAGCCTTCAGTCATTGTGGTCCAAGGACCAAAGCCTGGGAAGCCAGCTGACCTTGCAAGGATGAGGCAGATACTTTTAAAGCTCAAGCACAATACTCCTTCTCACCTGAAGCTCGCACCACCGCAAGCAGTGACCGCAACCAAGGATGGTAAGACTGTTGATGTCGCTGCCGATACACCTAAGCCTGCAGCTGTTGCATCTACCCAAGAGGCAGTGGCAGTTGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_15478.p1 GENE.S_Transcript_15478~~S_Transcript_15478.p1 ORF type:5prime_partial len:308 (+),score=78.38,Clathrin_lg_ch|PF01086.13|3.9e-10 S_Transcript_15478:1-924(+)
QVVSAHCSDHNSHILSLFSLHFTVGFLSSILKVHHLNNSNSKSPERMSSLNHDTFDESSHSFEDDVTGGGYAPPPQYTDFSDPHSVNNDDVFGGSNQEDPIFGEAANGPVFVESSNGPILPPPSEMQEEGSALREWRRQNAMILEQKEKREKEILCQIIEEANEYKTAFHEKRKVTCQNNKTNNREKEKSFLANHEKFHKEADKSYWKAIAELIPNEVPAIEKKRGKKDQEKKPSVIVVQGPKPGKPADLARMRQILLKLKHNTPSHLKLAPPQAVTATKDGKTVDVAADTPKPAAVASTQEAVAVA*

Click here to download the sequence:
Link to NCBI Protein BLAST