Transcript Information: S_Transcript_154866.p1


Annotated TAIR IDAT1G45688.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 258 Blast hits to 242 proteins in 39 species: Archae - 0; Bacteria - 11; Metazoa - 10; Fungi - 14; Plants - 198; Viruses - 17; Other Eukaryotes - 8 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:17191502-17192870 | Forward length=342
E-Value2E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2363866584185
Replicate 20.8034069026546
Replicate 30.92988585295465
Condition 2: 8 Hour
Replicate 10.35840992129635
Replicate 20.06266624268831
Replicate 30.53737430936928
Condition 3: 24 Hour
Replicate 10.55071134850237
Replicate 21.1427131887234
Replicate 31.201049733577


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_154866.p1 GENE.S_Transcript_154866~~S_Transcript_154866.p1 ORF type:5prime_partial len:357 (+),score=30.15 S_Transcript_154866:1-1071(+)
TATTCCCTCCCCTACCCAAAACCCCCACTACATAATTCAAGGACGACCAGTTCTTCATTAAACATCATTGCCCAAAATAAAAGGAGAAAAATGCATTCCAAGACTGACTCAGATGTAACAAGCCTACCGGGCTCATCCCCGACGAGGTCGCCGCCTCGTCGGGCCGGGCCAGTCTACTACGTTCAAAGCCCATCAAGAGACTCCTCCTCCCACGATGGCGAAAAGGCCACCACAAACTCCTTCCACTCAACCCCAGTTATAAGCCCAATGGGCTCTCCGCCCCATTCTCATTCCAACTCCTCCTTGGGCCCCCACTCGCGGGAGTCCTCCTCGACCCGCTACTCGGGCTCAGCCAAGCCCGGGTCCAAGGGAGATGGGCGAAAGGTCAAGCCCGGAGGTGGAAATGGTCAACGCTGGAAAGATCATCACCGTCATCCCTTTGATGCTATTGAAGAGGAGAGCCTTTTGGGAGTTGAGGATGAGGAAAAGGGAGGTATTCCCAGAAGGTGTTGCTATTTTATTTGGTTTCTGGTCGCCTTTTTTGCTCTCTTTTCTTTCTTTTCTTTGGTCTTGTGGGGTGCTAGTCGCAACCAGAAGCCACTCATCAACGTCAAGAATATAAGATATTCAGAGTTTGACGTACAAGCGGGGCTGGACAGTTACGGAGTTCCAACGGCGATGGCAACGATGAACGTAACAGTGAAGCTGATATATAGAAACAGAGGCACCTTTTTTGGAGTTCATGTCACTTCAACTCCTCTTCAACTCTCCTTTGAGGACCTCATTTTGGCCTCCGGAATGATGAAATATTTCTACGAGGGCAGGAAAAGCCAAAGGCAAGTAACAGTGCAGCTGAAGGGGCAGAGAGTGCCTTTGTATGGGGGTGGCTACACCCTGAGCAGCAATCATTTAGCACCCCTAACTCCGGTTCCATTGAGCCTAAGCTTCAGGGTCCGGTCCCGAGCCTACGTGTTAGGGAGGCTGGTTAAGCCCAAGTTCTACAAGGCAATCAACTGTGCTCTGGTTATGGATCCCAAAAAAAATGAACATGGCCTTGTCTCTCAAACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_154866.p1 GENE.S_Transcript_154866~~S_Transcript_154866.p1 ORF type:5prime_partial len:357 (+),score=30.15 S_Transcript_154866:1-1071(+)
YSLPYPKPPLHNSRTTSSSLNIIAQNKRRKMHSKTDSDVTSLPGSSPTRSPPRRAGPVYYVQSPSRDSSSHDGEKATTNSFHSTPVISPMGSPPHSHSNSSLGPHSRESSSTRYSGSAKPGSKGDGRKVKPGGGNGQRWKDHHRHPFDAIEEESLLGVEDEEKGGIPRRCCYFIWFLVAFFALFSFFSLVLWGASRNQKPLINVKNIRYSEFDVQAGLDSYGVPTAMATMNVTVKLIYRNRGTFFGVHVTSTPLQLSFEDLILASGMMKYFYEGRKSQRQVTVQLKGQRVPLYGGGYTLSSNHLAPLTPVPLSLSFRVRSRAYVLGRLVKPKFYKAINCALVMDPKKNEHGLVSQT*

Click here to download the sequence:
Link to NCBI Protein BLAST