Transcript Information: S_Transcript_155007.p1


Annotated TAIR IDAT5G20610.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26160.1); Has 918 Blast hits to 759 proteins in 180 species: Archae - 6; Bacteria - 105; Metazoa - 264; Fungi - 89; Plants - 167; Viruses - 5; Other Eukaryotes - 282 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6969184-6972794 | Forward length=1164
E-Value1E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3174753086723
Replicate 20.87377384386197
Replicate 30.36520269472476
Condition 2: 8 Hour
Replicate 11.0557123919373
Replicate 20.66451035563544
Replicate 30.63314398826677
Condition 3: 24 Hour
Replicate 11.7302878012352
Replicate 22.4683359142557
Replicate 31.7480624835229


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_155007.p1 GENE.S_Transcript_155007~~S_Transcript_155007.p1 ORF type:internal len:101 (+),score=27.68,LysM|PF01476.16|7.9e-06 S_Transcript_155007:1-300(+)
CAGGAACAAGAATTAATTCCTCAGTACAAAATCAGTGAAGTGCATGTTGCTGGTCTGAAAACTGAACCTGGTAAGAAAAAGTTATGGGGCAGTGCGGCACAGCATCAATCTGGATCTCGTTGGTTGCTCGCCAACGGAATGGGGAAGAACAACAAGCATCCATTTATGAAATCCAAATCTGCTGCCAAATCTTCGTTGCCAGCCACAGTTAAAGCTCAGTCTGGTGATACTTTGTGGAGTATTTCTGCTCGATTTCATGGAAATGGGGCAAAATGGAAGGAATTGGCTGCTCTTAATCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_155007.p1 GENE.S_Transcript_155007~~S_Transcript_155007.p1 ORF type:internal len:101 (+),score=27.68,LysM|PF01476.16|7.9e-06 S_Transcript_155007:1-300(+)
QEQELIPQYKISEVHVAGLKTEPGKKKLWGSAAQHQSGSRWLLANGMGKNNKHPFMKSKSAAKSSLPATVKAQSGDTLWSISARFHGNGAKWKELAALNP

Click here to download the sequence:
Link to NCBI Protein BLAST