Transcript Information: S_Transcript_155330.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value6E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.64909759110196
Replicate 21.0762336369519
Replicate 31.5743799095757
Condition 2: 8 Hour
Replicate 11.300328677874
Replicate 22.1826193794855
Replicate 31.0397974441454
Condition 3: 24 Hour
Replicate 11.0656040727119
Replicate 20.55277589210603
Replicate 33.3834449811741


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_155330.p1 GENE.S_Transcript_155330~~S_Transcript_155330.p1 ORF type:5prime_partial len:82 (+),score=15.03,RVT_1|PF00078.23|1.4e-06 S_Transcript_155330:3-248(+)
CTTTTTACTCTTGTAGCTGATGTCTTGAGTAGGATGTTAGATAGGGCGGTGGAGAGGGGGATGGTGGCTGGATTTATGGTTGGGCGGGAAGCTGTTCAAATCTCCCACTTGCTTTTTGCGGATGATACTATTCTTTTCCTAGATGCTGATTTTGTGTATTTCCAGCACTTGCTCACACTGCTGCAACTGTTTGAAGCCATTTCTGGGATGCGTGTTAATCTCAACAAGTGTAGTTTGTCTTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_155330.p1 GENE.S_Transcript_155330~~S_Transcript_155330.p1 ORF type:5prime_partial len:82 (+),score=15.03,RVT_1|PF00078.23|1.4e-06 S_Transcript_155330:3-248(+)
LFTLVADVLSRMLDRAVERGMVAGFMVGREAVQISHLLFADDTILFLDADFVYFQHLLTLLQLFEAISGMRVNLNKCSLSF*

Click here to download the sequence:
Link to NCBI Protein BLAST