Transcript Information: S_Transcript_155437.p1


Annotated TAIR IDAT5G53440.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21683679-21687970 | Reverse length=1181
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3396045041917
Replicate 20
Replicate 32.2293417243913
Condition 2: 8 Hour
Replicate 10.93737979415969
Replicate 21.2292224527322
Replicate 31.6396805849986
Condition 3: 24 Hour
Replicate 10.72016099419541
Replicate 21.7433701212575
Replicate 31.1086612925326


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_155437.p1 GENE.S_Transcript_155437~~S_Transcript_155437.p1 ORF type:5prime_partial len:91 (+),score=24.35 S_Transcript_155437:3-275(+)
AATGATGATGATAAGGGTCAAAATGATTCTGTTGATACAAATGCTGACATAGATATTGTTGGTAGTGAGTGTAAGACTGGTGGTGCAGAGTCGGCTTCAAAGACCGGTGGTGCAGAGCCGGCTTCTGATGAACAGTTGGATGTTGCCGTAAGTGGTCCCTTAATTTTGTCCCATGATTCTGTTAAGGTTTGTGAGGCTTTAATGCCAGTGTCAAATGAGTCGGAGTCGGTTATTTTAAGTCGGATACATCATGCTCCTGAAAGTACACATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_155437.p1 GENE.S_Transcript_155437~~S_Transcript_155437.p1 ORF type:5prime_partial len:91 (+),score=24.35 S_Transcript_155437:3-275(+)
NDDDKGQNDSVDTNADIDIVGSECKTGGAESASKTGGAEPASDEQLDVAVSGPLILSHDSVKVCEALMPVSNESESVILSRIHHAPESTH*

Click here to download the sequence:
Link to NCBI Protein BLAST