Transcript Information: S_Transcript_155441.p1


Annotated TAIR IDAT5G53440.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21683679-21687970 | Reverse length=1181
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2618826435719
Replicate 23.7754506194678
Replicate 34.4380915709199
Condition 2: 8 Hour
Replicate 13.7633041736117
Replicate 24.0676088435867
Replicate 33.1916777162539
Condition 3: 24 Hour
Replicate 13.7381618807434
Replicate 24.6054804272791
Replicate 34.4509490126676


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_155441.p1 GENE.S_Transcript_155441~~S_Transcript_155441.p1 ORF type:5prime_partial len:187 (-),score=60.53 S_Transcript_155441:132-692(-)
GGTGCTAATGAGCAATTAGATAGCTCTGTTGATTGCGGTGTCCAACTTGAAGAACCAACTCTCGAGGTGGCAGATTTGGTTCCAATCACTGCTGAGGAAGGGAAGAATATTGTACCCATAAACAGTGAAGAAGGGCCAACTAGTGTACCTTCTTTGGAGAGTATGGATCTGCCCTTGGATGTCGGGAATGAAAGCGAAATACCTGTTGTTAATGTGGAGGAGATGGAGGAAAAAATCTCCGGAGAAATGATGTTTGAGAATAATGATGATGATAAGGGTCAGAATGATTCCATTGACACAAATGCTGACATAGATATTGTTGGTAGTGAGTGTAAGACTGGTGGTGCAGAGTCGGCTTCAAAGACTGGTGGTGCAGAGTCGGCTTCAAAGACTGGTGGTGCAGAGTCGGCTTCTGATGAACAGTTGGATGTTGCTGTAAGTGGTCCCTTAATTTTGTCCCATGATTCTGTTAAGGTTTGTGAGGCTTTAATGCCAGTGTCAAATGAGTCGGAGTCGGTTATTTTAAGTCGGATACATCATGCTCCTGAAAGTACACATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_155441.p1 GENE.S_Transcript_155441~~S_Transcript_155441.p1 ORF type:5prime_partial len:187 (-),score=60.53 S_Transcript_155441:132-692(-)
GANEQLDSSVDCGVQLEEPTLEVADLVPITAEEGKNIVPINSEEGPTSVPSLESMDLPLDVGNESEIPVVNVEEMEEKISGEMMFENNDDDKGQNDSIDTNADIDIVGSECKTGGAESASKTGGAESASKTGGAESASDEQLDVAVSGPLILSHDSVKVCEALMPVSNESESVILSRIHHAPESTH*

Click here to download the sequence:
Link to NCBI Protein BLAST